Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_E14
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 263 2e-71
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 259 4e-70
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 105 5e-24
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 60 4e-10
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.009
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 35 0.015
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 32 0.11
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 32 0.11
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 31 0.14
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.19
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 31 0.25
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 31 0.25
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.57
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 27 2.3
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.0
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 4.0
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.3
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 26 7.0
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 26 7.0
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 9.3
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.3
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 263 bits (645), Expect = 2e-71
Identities = 115/141 (81%), Positives = 129/141 (91%)
Frame = -1
Query: 555 PPNQMVKCDPRHGKYMACCMLYRGDVVPRDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 376
P NQMVKCDPR G+YMA C+LYRGDV+PRDV AA+ +IK++RTIQFVDWCPTGFK+GI Y
Sbjct: 302 PYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICY 361
Query: 375 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 196
+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGE
Sbjct: 362 EPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGE 421
Query: 195 FSEAREDLAALEKDYEEVGMD 133
FSEAREDLAALE+DYEEVG D
Sbjct: 422 FSEAREDLAALERDYEEVGQD 442
Score = 85.4 bits (202), Expect = 8e-18
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3
Query: 688 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEP 554
EFQTNLVPYPRIHFPLVTY+P++SA KA+HE SV EITN CFEP
Sbjct: 258 EFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEP 302
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 259 bits (634), Expect = 4e-70
Identities = 114/141 (80%), Positives = 127/141 (90%)
Frame = -1
Query: 555 PPNQMVKCDPRHGKYMACCMLYRGDVVPRDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 376
P NQMVKCDPR G+YMA C+LYRGDV+PRDV AA+ TIK KRTIQFVDWCPTGFK+GI
Sbjct: 298 PYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICD 357
Query: 375 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 196
+PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGE
Sbjct: 358 RPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGE 417
Query: 195 FSEAREDLAALEKDYEEVGMD 133
FSEAREDLAALE+DYEEVG D
Sbjct: 418 FSEAREDLAALERDYEEVGQD 438
Score = 86.6 bits (205), Expect = 4e-18
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = -3
Query: 688 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEP 554
EFQTNLVPYPRIHFPLVTYAP++SA KA+HE SV EITN CFEP
Sbjct: 254 EFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEP 298
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 105 bits (253), Expect = 5e-24
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Frame = -1
Query: 549 NQMVKCDPRHGKYMACCMLYRGDVVPRDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 370
N MV DPRHG+Y+ L+RG V ++V+ I +++TK + FV+W P + P
Sbjct: 298 NMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVP 357
Query: 369 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 190
P DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 189 EAR---EDLAALEKDYEEVGMD 133
EA DL + + Y+E G+D
Sbjct: 410 EAESNMNDLVSEYQQYQEAGID 431
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = -3
Query: 676 NLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 557
N+VP+PR+HF +V +AP+ + + + +SV E+T F+
Sbjct: 256 NMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFD 295
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 60.1 bits (139), Expect = 4e-10
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = -1
Query: 555 PPNQMVKCDP-RHGKYMACCMLYRGDVVPRDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 379
P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++
Sbjct: 302 PKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALS 361
Query: 378 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE- 202
+ P + ++ + ML+N T+IA + R ++D + + AF+ Y E + E
Sbjct: 362 KKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFED 416
Query: 201 --GEFSEAREDLAALEKDYE 148
EF +R+ +A L +YE
Sbjct: 417 DLNEFDSSRDVVADLINEYE 436
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 676 NLVPYPRIHFPLVTYAP 626
+L+P PR HF L +Y P
Sbjct: 259 SLIPSPRCHFLLTSYTP 275
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 35.5 bits (78), Expect = 0.009
Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 4/153 (2%)
Frame = -2
Query: 533 AIPVMASTWLAVCCTVVTSCPGM*TRPSLPSKPSVLSNSSTGVQPVSRSVST-TSHPPWC 357
+IP ++ V TV + + P P+ S SS+ + S S +T TS PP
Sbjct: 290 SIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTG 349
Query: 356 PEATWPRFNVP---SACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPK 186
T VP ++ TPPP T+SS + S SCT TS + +S
Sbjct: 350 NSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTST-SCT-TSTSIPPTGNSTT 407
Query: 185 PVRTWLPSKRITKKSAWTPLKARVREPKSTKPV 87
PV +P + T P ++ PV
Sbjct: 408 PVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Score = 28.7 bits (61), Expect = 0.99
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = -2
Query: 434 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKL----GLALTT 267
S +ST + P S S ++ P P T P + S P PP S L T
Sbjct: 169 STSCTTSTSIPPTGGSSSLST--PITP--TVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Query: 266 SSTSCTPSVLSCTGTS 219
+STSCT S TG S
Sbjct: 225 TSTSCTTSTSIPTGGS 240
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 34.7 bits (76), Expect = 0.015
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 7/126 (5%)
Frame = -2
Query: 455 PSLP----SKPSVLSN-SSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSL 291
P+LP SKP V+ N V P +R + P+ ++P P+ CP+ PP L
Sbjct: 173 PNLPHQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPPPLCPATYCPSNPPQL 231
Query: 290 KLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPSKRITKKSAWTPLKAR 117
A+ SS S ++ + T + + P + WLP + T + P A
Sbjct: 232 APATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPT----FQPPSAN 287
Query: 116 VREPKS 99
V +P S
Sbjct: 288 VYQPAS 293
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 488 VVTSCPGM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 354
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 488 VVTSCPGM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 354
VV P + RP++P P S PV V + PP P
Sbjct: 642 VVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -2
Query: 326 PSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--KRI 153
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 152 TKKSAWTPLKARVREPKSTK 93
S+ TP+ V EP+ TK
Sbjct: 194 LGTSSKTPVYVVVDEPRFTK 213
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.5 bits (68), Expect = 0.14
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = -2
Query: 443 SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTS 264
S P+ S + PVS + T + PP A R N A P + + A T S
Sbjct: 1001 SMPAAKSKPAPMANPVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVS 1058
Query: 263 STSCTPSVLSCTGTSVRVWRRESSP 189
++ PS ++ +S + S+P
Sbjct: 1059 ASKPAPSTVTSAASSPSNISKPSAP 1083
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.19
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -2
Query: 434 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTS 255
S+L +S+ P+S + STT+ T ++ TP S+ + T +STS
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS 339
Query: 254 CTP--SVLSCTGTS 219
TP SV S T TS
Sbjct: 340 STPLSSVNSTTATS 353
Score = 25.4 bits (53), Expect = 9.3
Identities = 29/96 (30%), Positives = 39/96 (40%)
Frame = -2
Query: 503 AVCCTVVTSCPGM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVP 324
+V T TS T S S + + +ST P+S STT+ T
Sbjct: 310 SVNSTTTTSASS--TPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTA 367
Query: 323 SACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSV 216
++ TP S+ A + SST T S S T TSV
Sbjct: 368 TSASSTPLTSVNSTSATSASSTPLT-SANSTTSTSV 402
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.7 bits (66), Expect = 0.25
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = -2
Query: 500 VCCTVVTSCPGM*T-RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVP 324
VCC +C SL + S +S + GV+P T P AT R+N
Sbjct: 1564 VCCASFANCVYCSRCSDSLLGEESTVS-TMYGVKP------TLPETPKPAIATHSRYNAS 1616
Query: 323 SACCPTPPPSLKLGL-ALTTSSTSCTPSVLS 234
+ P P P G+ A+ T++TS TP LS
Sbjct: 1617 FSSSPPPQPGNSSGMSAMNTNTTSTTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.7 bits (66), Expect = 0.25
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = -2
Query: 500 VCCTVVTSCPGM*T-RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVP 324
VCC +C SL + S +S + GV+P T P AT R+N
Sbjct: 1564 VCCASFANCVYCSRCSDSLLGEESTVS-TMYGVKP------TLPETPKPAIATHSRYNAS 1616
Query: 323 SACCPTPPPSLKLGL-ALTTSSTSCTPSVLS 234
+ P P P G+ A+ T++TS TP LS
Sbjct: 1617 FSSSPPPQPGNSSGMSAMNTNTTSTTPVSLS 1647
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.57
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 446 PSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLG 282
P+ P + S P + S TS PP + P + P + P+ PPSL +G
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMG 442
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -2
Query: 452 SLPSKPSVLSNSSTGVQPVSRSVSTT-SHPPWCPEATWPRFNVPSACCPTPPPSLKLGLA 276
S P+ P + + S T PV S S PP P + P + + P PPS +
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 275 LTTSSTSCTP 246
L + P
Sbjct: 459 LPAGMPAAPP 468
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 383 STTSHPPWCPE--ATWPRFNVPSACCPTPPP 297
++TS PP P ++ P VPS P PPP
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPP 255
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.7
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -2
Query: 482 TSCPGM*TRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 312
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 311 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 180
P P P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = -1
Query: 693 HPSSRLTWCLTPVSTSHWSRTRQSSLPRRP-----TMNSFPLPRS------QTHASSPPN 547
H S+ + + +S++S S+LP P +++S LP + ++ S+ PN
Sbjct: 191 HASNSFNFVKRDIDSSNFSNLDASALPISPPSDFFSVHSHNLPNAPPSIPANSNNSASPN 250
Query: 546 QMVKCDPRH 520
Q +K P+H
Sbjct: 251 QRIKASPKH 259
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 527 PVMASTWLAVCCTVVTSC 474
P AS W AV CT V SC
Sbjct: 551 PTGASQWAAVACTSVVSC 568
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 443 SKPSVLSNSSTGVQP--VSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 297
S P+ S++GV VS S S PP P A P ++PS P PPP
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 392 RSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLS 234
++ S T+ P P ++ FN PSA P P++ + +T TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT--TPSATS 503
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 452 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 366
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +1
Query: 421 LDSTLGFDGSDGRVHIPGHDVTTVQHTASHVLAMTGIAFHH 543
+D+ + S VH+PGH+ + H G+ H+
Sbjct: 182 IDNLVSIGASLAHVHVPGHEPIAKEDEMKHDEMELGMGIHN 222
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 589 SVAEITNACFEPAKPDGEMRSPSWQV 512
SV ++T ACFEP+ ++ P W +
Sbjct: 800 SVTKVTCACFEPSLDYVVVKIPRWDL 825
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 9.3
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
Frame = -2
Query: 536 NAIPVMASTWLAVCCTVVTSCPGM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWC 357
+ +PV S T + + P + P+ S ++ SST V +V+ TS
Sbjct: 244 STLPVSTSEATVSFSTDIPATPSTLSSPASSSSSYLVETSSTLTDSVFTTVTATSD---S 300
Query: 356 PEATWPRFN-VPSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 180
T+ N V S+ T PS L +T +S S+LS S R SS
Sbjct: 301 SVITYTLINSVTSSSETTNLPSSSSSL-VTIGESSFPSSLLSLLTQSFSTVRSTSSSS-- 357
Query: 179 RTWLPSKRITKKSAWTPLKARVREPKSTKPVKYLLWRTRTVLHSGD 42
+ ++T S P+ + V P + P +L + ++ SGD
Sbjct: 358 -----TDQLTSAS---PISSSVISPSVSSPTSSILTNSGSI-KSGD 394
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 455 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 360
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,119,188
Number of Sequences: 5004
Number of extensions: 71028
Number of successful extensions: 291
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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