Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_E08
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA...    35   0.11 

>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
           protein.
          Length = 1118

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 23/78 (29%), Positives = 33/78 (42%)
 Frame = -2

Query: 726 PLCIKPPXPGXSXTSTXIIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPVLKPPLSSEAP 547
           P  + PP  G    S   + SP+ I  PP +  P P++ + P    + P   P   S  P
Sbjct: 600 PGSLLPPNTGLPPGSIPPLGSPNQIGHPPGSQKP-PNVGIYPPSTGWIPPSGPLTQSGHP 658

Query: 546 SAYLTPSSLGMXKGVSPP 493
              L P + G+  G  PP
Sbjct: 659 PGSLLPPNTGLPPGSIPP 676



 Score = 33.9 bits (74), Expect = 0.25
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = -2

Query: 726 PLCIKPPXPGXSXTSTXIIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPVLKPPLSSEAP 547
           P  + PP  G    S   + SP+ I  PP +  P P++ + P    + P   P      P
Sbjct: 541 PGSLLPPNTGLPPGSIPPLGSPNQIGHPPGSQKP-PNVGIYPPSTGWTPPSGPLTQGGHP 599

Query: 546 SAYLTPSSLGMXKGVSPP 493
              L P + G+  G  PP
Sbjct: 600 PGSLLPPNTGLPPGSIPP 617



 Score = 31.9 bits (69), Expect = 1.0
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = -2

Query: 726  PLCIKPPXPGXSXTSTXIIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPVLKPPLSSEAP 547
            P  + PP  G    S   + SP+ I  PP +  P P++ + P      P L+PP     P
Sbjct: 836  PGSLLPPNTGLPPGSISPLGSPNQIGHPPGSQKP-PNVGIYPPSTGSIPPLRPPNQGGHP 894

Query: 546  SAYLTPSSLGM 514
                 P ++G+
Sbjct: 895  PGSQKPPNVGI 905



 Score = 30.7 bits (66), Expect = 2.3
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 726 PLCIKPPXPGXSXTSTXIIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPVLKPPLSSEAP 547
           P  + PP  G    S   + SP+ I  PP +  P P+  + P      P   P      P
Sbjct: 718 PGSLLPPNTGLPSGSIPPLGSPNQIGHPPGSQKP-PNSGIYPPSTGSIPPSGPLTQGGHP 776

Query: 546 SAYLTPSSLGMXKGVSPP 493
              L P + G+  G  PP
Sbjct: 777 PGSLLPPNTGLPSGSIPP 794



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 21/73 (28%), Positives = 28/73 (38%)
 Frame = -2

Query: 711  PPXPGXSXTSTXIIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPVLKPPLSSEAPSAYLT 532
            PP  G    S   + SP+ I  PP +  P P+  + P      P   P      P   L 
Sbjct: 959  PPNTGLPPGSIPPLGSPNQIGHPPGSQKP-PNSGIYPPSTGSIPPSGPLTQGGHPPGSLL 1017

Query: 531  PSSLGMXKGVSPP 493
            P + G+  G  PP
Sbjct: 1018 PPNTGLPPGSIPP 1030



 Score = 28.7 bits (61), Expect = 9.5
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = -2

Query: 726  PLCIKPPXPGXSXTSTXIIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPVLKPPLSSEAP 547
            P  + PP  G    S   + SP+ I  PP +  P P+  + P    + P   P      P
Sbjct: 777  PGSLLPPNTGLPSGSIPPLGSPNQIGHPPGSQKP-PNSGIYPPSTGWIPPSGPLTQGGHP 835

Query: 546  SAYLTPSSLGMXKG-VSP 496
               L P + G+  G +SP
Sbjct: 836  PGSLLPPNTGLPPGSISP 853


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,696,620
Number of Sequences: 53049
Number of extensions: 666623
Number of successful extensions: 1940
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)