Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_E07
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 35 0.072
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 35 0.072
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.13
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.29
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 33 0.29
12_02_1174 - 26696869-26698191 33 0.38
08_01_0059 - 394001-394708 33 0.38
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 33 0.38
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 32 0.50
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.5
01_01_0070 - 542603-542686,542803-543441 31 1.5
12_02_0299 - 17051570-17052474,17053542-17053755 30 2.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.0
03_01_0515 - 3864796-3865425 30 2.0
08_02_1615 + 28257275-28258428,28258523-28259144 30 2.7
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 30 2.7
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 3.6
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 3.6
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.6
07_03_0600 + 19866757-19867218,19867920-19868429 29 4.7
07_01_0080 + 587674-588510 29 4.7
06_03_0905 + 25843547-25844314 29 4.7
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 29 6.2
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 29 6.2
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 6.2
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 28 8.2
06_01_0486 - 3455030-3455770 28 8.2
04_03_0904 + 20717005-20718087 28 8.2
03_05_0576 + 25765137-25766420 28 8.2
01_06_0146 + 26969011-26969995,26970878-26970930 28 8.2
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 35.1 bits (77), Expect = 0.072
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 441 DRLXHPRSTPNSALXXXXXPPPTXTXXGFXXXPXPXKPXXSXPPPQXXKQXTXXPPVXXP 620
D L R P L PPP T P P P + PPP ++ PP P
Sbjct: 11 DLLRRHRRAPLPLLLSALSPPPPTTPESCPDGPSPVAPYFAPPPPPLCRRRRSWPPPPPP 70
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 35.1 bits (77), Expect = 0.072
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 463 QPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
QPP P PPPP V+ P P PP PP
Sbjct: 81 QPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPP 117
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXXPXXXXLSTPP 633
P PP P PP P PP PP S+ P S PP
Sbjct: 60 PGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPP 118
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXXPXXXXLSTPP 633
P P P PPPP P +P PP PP P S PP
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 456 PRSTPNSALXXXXXPPPTXTXXGFXXXPXPXKPXXSXPPPQXXKQXTXXPPVXXP 620
P+S +A+ PPP P P P + PPP K PP P
Sbjct: 300 PQSIAAAAVASPAPPPPPPPKPA-AAAPPPPPPPKAAPPPPPPKGPPPPPPAKGP 353
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 466 PPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXP 570
PP P PPPP + P P PP P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPP 349
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 460 AQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXXPXXXXLSTPP 633
A PP P PPPP P P PP PP P PP
Sbjct: 324 AAPPPPPPPKAAPPPPPPKGP--PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
P QPP P PPPP S P P P PP
Sbjct: 1155 PCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPP 1193
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 454 IPAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
I PP P PPPP + +P NP PP P
Sbjct: 651 IAVAPPPAPPIAGAAPPPPMANGAAAAAPPGGNPAPPAGP 690
>12_02_1174 - 26696869-26698191
Length = 440
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
P PPTLP PPP +P P P PP
Sbjct: 210 PQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPP 248
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXXPXXXXLSTPP 633
P PP+LP PPPP S P P P PP + P S P
Sbjct: 146 PQPPPSLPPPPPPPPPPPPPRPPS-VKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKP 203
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/115 (23%), Positives = 29/115 (25%), Gaps = 4/115 (3%)
Frame = +3
Query: 477 ALXXXXXPPPTXTXXGFXXXPXPXKPXXSXPPPQXXKQXTXXPPVXXPLHSXXXXXAXRF 656
AL PPP P P PPP PP P +
Sbjct: 118 ALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQP 177
Query: 657 XXXXPXXXNPXQQPXXLXENXPTKNP----XXPXLXXXLXQXXPPSXPXXTXPPR 809
P P P P+ P P L PP P T PPR
Sbjct: 178 KPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPP-PPPPTVPPR 231
>08_01_0059 - 394001-394708
Length = 235
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXV---SXXSPXXXNPXPPXPP 573
P +PP P PPPP H SP P PP PP
Sbjct: 31 PIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSPP 72
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXP 570
P PP PPPP SP P PP P
Sbjct: 3 PPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTP 40
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/71 (29%), Positives = 27/71 (38%)
Frame = +1
Query: 424 HPVXTXTXSXIPAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXX 603
HPV + + S P QPP +P PP + P +P PP P +
Sbjct: 543 HPVGSLSEST-PMQPPVMPPPIPKLLSPPAPQ--APMPPLKASPVPPPEPSPPPAPKAAP 599
Query: 604 PXXXXLSTPPG 636
P ST PG
Sbjct: 600 PPPPPKSTGPG 610
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSN 591
P QP P PPPP + P PP PP SN
Sbjct: 342 PVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPPSVPSN 386
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 460 AQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXXP 606
A PP P PPPP + P P PP PP +N P
Sbjct: 348 APPPPPPPPPPPPPPPPPKLNTAPKPP----PPPPPPPSVPSNNNLPKP 392
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXXPXXXXLSTPPG 636
P PP LP PPPP P P PP PP N P PP
Sbjct: 588 PPPPPPLPNCLVPSPPPPPPPP--PILPNRSVPPPPPPP-PPLPNHSVLPPPPPPPPPPS 644
Query: 637 XXXRXXSXXP 666
R P
Sbjct: 645 LPNRLVPPPP 654
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 466 PPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
P P PPPP S P P PP PP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPP 570
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXP 570
P PP LP PPPP S P P PP P
Sbjct: 621 PPPPPPLPNHSVLPPPPPPPPPPSL--PNRLVPPPPAP 656
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +1
Query: 427 PVXTXTXSXIPAQ-PPTLPXXXXXXPPPPXHXXVSXX--SPXXXNPXPPXPPXXXXSNXX 597
P T T PA+ PP P PPPP +P P P PP
Sbjct: 57 PTATPTPPVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPAT 116
Query: 598 XXPXXXXLSTPP 633
P STPP
Sbjct: 117 PPPALPP-STPP 127
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
P PP P PP P + P P PP PP
Sbjct: 291 PPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPP 329
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
PA P+ PPPP + P P PP PP
Sbjct: 336 PAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPP 374
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 454 IPAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
+ + PP P PPPP V+ P P PP PP
Sbjct: 57 VTSSPPP-PAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPP 95
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +1
Query: 424 HPVXTXTXSXIPAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXP 570
HP + P P L PPPP H + P P PP P
Sbjct: 48 HPQPDAPAAAAPPPPAPLTPPPPKSPPPPPHIQTTDLPP--PKPLPPAP 94
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
P PP PPPP H S P PP PP
Sbjct: 769 PPPPPFSVQQQQLPPPPPYHLRHSIDGMHHQLPGPPLPP 807
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 460 AQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
A PP+ P PPPP + P PP PP
Sbjct: 321 ASPPSNPPPAPPPPPPPPSRFNNTTPKPPPPPPPPEPP 358
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = +1
Query: 424 HPVXTXTX-SXIPAQPPTLPXXXXXXPP---PPXHXXVSXXSPXXXNPXPPXP 570
+P T T + P PTLP PP PP H P P PP P
Sbjct: 38 NPATTPTPLTPNPNPSPTLPPPPMSTPPVVAPPMHSFAPSFRPLGAPPPPPPP 90
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +1
Query: 466 PPTLPXXXXXXPPPPX-HXXVSXXSPXXXNPXPPXPPXXXXSNXXXXPXXXXLSTPPG 636
PP PPPP H V P PP PP P L PPG
Sbjct: 1175 PPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPP-GVPGGPPPPPGGRGLPAPPG 1231
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/79 (24%), Positives = 23/79 (29%)
Frame = +3
Query: 498 PPPTXTXXGFXXXPXPXKPXXSXPPPQXXKQXTXXPPVXXPLHSXXXXXAXRFXXXXPXX 677
PPP G P P + + PPP Q P P + P
Sbjct: 4 PPPPTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPP---QPYCQQQQPLPPHYYQAGPPH 60
Query: 678 XNPXQQPXXLXENXPTKNP 734
P QQP + P P
Sbjct: 61 APPPQQPPAMWGQPPPPPP 79
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 499 PPPPXHXXVSXXSPXXXNPXPPXPP 573
PPPP S SP P PP PP
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPP 115
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 PXXVTXXAFHPVXTXTXSXIPAQPP-TLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
P V +P T + PP T P P PP V+ +P P PP PP
Sbjct: 112 PVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPP----VTYPTPPTTTPCPPPPP 167
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = +3
Query: 471 NSALXXXXXPPPTXTXXGFXXXPXPXKPXXSXPPPQXXKQXTXXPP 608
N L PPP+ P P +P + PPP + PP
Sbjct: 27 NRRLASDLTPPPSRPEPDQAAPPPPPQPHTAPPPPPPNAEPEAPPP 72
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +1
Query: 463 QPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSN-XXXXPXXXXLSTPP 633
Q PTLP PPP H P P PP P S P S PP
Sbjct: 249 QQPTLPQPQHQAPPPS-HPPALPALPAPNAPPPPAPQSQPPSQFPGHLPHSQVQSVPP 305
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPPXXXXSNXXXXPXXXXLSTPP 633
PA P TLP P PP V P P PP P P PP
Sbjct: 251 PAAPGTLPNGSGGPPRPPP-PQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPP 308
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = +1
Query: 427 PVXTXTXSXIPAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
PV + T + P QP P PP P + P P PP
Sbjct: 173 PVVSRTPTQAPHQPKAQPSVPKVSPPQPEKSPPNATPPKVERPSVAPPP 221
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = +1
Query: 424 HPVXTXTXSXIPAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPP-XPPXXXXSNXXX 600
HP T P PP +P PP P P PP PP S
Sbjct: 76 HPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPY 135
Query: 601 XPXXXXLSTPP 633
P S PP
Sbjct: 136 VPPPTPPSPPP 146
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/58 (27%), Positives = 19/58 (32%)
Frame = +3
Query: 456 PRSTPNSALXXXXXPPPTXTXXGFXXXPXPXKPXXSXPPPQXXKQXTXXPPVXXPLHS 629
P TP + P PT T + P P P P P+ T P P S
Sbjct: 267 PTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTYKPQPKPTPTPTPYKPQPKPTPS 324
>03_05_0576 + 25765137-25766420
Length = 427
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 448 SXIPAQPPTLPXXXXXXPPPPXHXXVSXXSPXXXNPXPPXPP 573
S P+ PP P PP VS P P P PP
Sbjct: 74 SPSPSPPPQPSSPPPPPPSPPPAAAVSVSPPTQPRPRPELPP 115
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 457 PAQPPTLPXXXXXXPPPPXHXXVSXXSPXXX-NPXPPXPP 573
P +P T PPPP + P NP PP PP
Sbjct: 9 PPEPATDGDDAQSHPPPPTPHPATDPPPISPQNPTPPPPP 48
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,484,099
Number of Sequences: 37544
Number of extensions: 262771
Number of successful extensions: 1720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -