Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_D23
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 105 5e-23
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 103 2e-22
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 102 3e-22
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 101 7e-22
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 99 2e-21
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 98 6e-21
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 86 3e-17
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 62 4e-10
01_06_1530 - 38019997-38020011,38020705-38020867,38021126-380212... 29 3.2
02_02_0106 + 6814391-6817007,6817086-6817462 29 4.2
04_04_1588 - 34633057-34633824 28 7.4
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 105 bits (251), Expect = 5e-23
Identities = 61/123 (49%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = -1
Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVET--LRRPTRKRSTLLKPKCNRPIQSGLV*RSTFP 546
YL MKG L ++ G R E + + + L PI+ GL F
Sbjct: 127 YLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLA--LNFS 184
Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 366
F + P RAC+LAKQAFDDAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD D
Sbjct: 185 VFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAED 244
Query: 365 GDE 357
G +
Sbjct: 245 GGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 103 bits (247), Expect = 2e-22
Identities = 61/123 (49%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Frame = -1
Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVE-TLRRPTRKRSTLLKPKC-NRPIQSGLV*RSTFP 546
YL MKG L ++ G R + TL + +K PI+ GL F
Sbjct: 132 YLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLA--LNFS 189
Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 366
F + P RAC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D
Sbjct: 190 VFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 249
Query: 365 GDE 357
G +
Sbjct: 250 GGD 252
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 102 bits (245), Expect = 3e-22
Identities = 57/123 (46%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = -1
Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVETLRRPTRKRSTLLKPKC--NRPIQSGLV*RSTFP 546
YL MKG L ++ G+ R E+ + + PI+ GL F
Sbjct: 105 YLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLA--LNFS 162
Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 366
F + P RAC+LAKQAFD+AI+ELD+L E+SYKDSTLIMQLLRDNLTLWTSD D
Sbjct: 163 VFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDD 222
Query: 365 GDE 357
G +
Sbjct: 223 GGD 225
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 101 bits (242), Expect = 7e-22
Identities = 61/127 (48%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Frame = -1
Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVET--LRRPTRKRSTLLKPKCNRPIQSGLV*RSTFP 546
YL MKG L ++ G R E+ + + L PI+ GL F
Sbjct: 122 YLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLA--LNFS 179
Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD-TQG 369
F + P +AC+LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD T+
Sbjct: 180 VFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTED 239
Query: 368 DGDEPAE 348
GDE E
Sbjct: 240 GGDEVKE 246
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 99 bits (238), Expect = 2e-21
Identities = 59/123 (47%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = -1
Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVET--LRRPTRKRSTLLKPKCNRPIQSGLV*RSTFP 546
YL MKG L ++ G R E + + L + PI+ GL F
Sbjct: 128 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA--LNFS 185
Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 366
F + P RAC+LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD D
Sbjct: 186 VFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISED 245
Query: 365 GDE 357
E
Sbjct: 246 TAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 98.3 bits (234), Expect = 6e-21
Identities = 57/116 (49%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = -1
Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVET--LRRPTRKRSTLLKPKCNRPIQSGLV*RSTFP 546
YL MKG L ++ G R E + + L + PI+ GL F
Sbjct: 346 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA--LNFS 403
Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 378
F + P RAC+LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 404 VFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 459
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 85.8 bits (203), Expect = 3e-17
Identities = 43/82 (52%), Positives = 53/82 (64%)
Frame = -1
Query: 584 PIQSGLV*RSTFPSFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLR 405
PI+ GL F + P +AC LAK AFD+A+AEL +L+E++YKDSTLIMQLLR
Sbjct: 159 PIRLGLA--LNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENYKDSTLIMQLLR 216
Query: 404 DNLTLWTSDTQGDGDEPAEGGD 339
DNL LW SD D D+ E D
Sbjct: 217 DNLALWNSDMADDADDIRERTD 238
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -3
Query: 606 AKAKMQPTHPIRLGLALNFSVFYYEIINSPCESVPLS*TGF 484
A+ + PT PIRLGLALN SVFY EI+NSP ++ L+ F
Sbjct: 150 AQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAF 190
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -1
Query: 539 ITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 369
+ + P RA +AKQA D+A AE+++ + YKDS L+MQLL++NL LWTS+ G
Sbjct: 161 LLEIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSELTG 217
>01_06_1530 -
38019997-38020011,38020705-38020867,38021126-38021211,
38021297-38022642,38022980-38023193
Length = 607
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -3
Query: 750 LKXVIQKVKCLPXNERXYYRYLAEVATRRNQTFRRGDSQKAYQEAFDIAKAKMQPTH 580
LK ++QKV+ L + RYL E+ +R Q F+ D+ ++A + K K++ H
Sbjct: 457 LKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFDADIDTKDAL-LEKIKLELKH 512
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 288 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 130
CL +N H S +SSP PT C N+K F KL N ++SL L
Sbjct: 93 CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 300 KCVCWGECGEILVVAALGRLVAIALSV*RPK 392
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,803,993
Number of Sequences: 37544
Number of extensions: 350843
Number of successful extensions: 897
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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