Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_D23
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   116   1e-26
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   109   2e-24
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   109   2e-24
Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...    95   5e-20
Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical pr...    64   8e-11
AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical ...    31   1.2  

>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  116 bits (280), Expect = 1e-26
 Identities = 68/131 (51%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
 Frame = -1

Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVETLRRPTRKRSTLLKPKCN--RPIQSGLV*RSTFP 546
           YL MKG     L +   G+ R+SVVE  ++  ++   + K K     PI+ GL     F 
Sbjct: 120 YLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLA--LNFS 177

Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 366
            F   +   P +AC LAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD   D
Sbjct: 178 VFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATD 237

Query: 365 GDE--PAEGGD 339
             +    EGG+
Sbjct: 238 DTDANETEGGN 248


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  109 bits (262), Expect = 2e-24
 Identities = 67/127 (52%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
 Frame = -1

Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVETLRRPTRKRSTLLKPKCN--RPIQSGLV*RSTFP 546
           YL MKG     L +    E R +VVE  ++  ++   + K K     PI+ GL     F 
Sbjct: 120 YLKMKGDYYRYLAE-VASEDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLA--LNFS 176

Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 366
            F   +   P  AC LAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G 
Sbjct: 177 VFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GA 235

Query: 365 GDEPAEG 345
            D+  EG
Sbjct: 236 EDQEQEG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  109 bits (262), Expect = 2e-24
 Identities = 67/127 (52%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
 Frame = -1

Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVETLRRPTRKRSTLLKPKCN--RPIQSGLV*RSTFP 546
           YL MKG     L +    E R +VVE  ++  ++   + K K     PI+ GL     F 
Sbjct: 120 YLKMKGDYYRYLAE-VASEDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLA--LNFS 176

Query: 545 SFITRLSTPPARACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 366
            F   +   P  AC LAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G 
Sbjct: 177 VFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GA 235

Query: 365 GDEPAEG 345
            D+  EG
Sbjct: 236 EDQEQEG 242


>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 45/68 (66%), Positives = 56/68 (82%)
 Frame = -3

Query: 699 YYRYLAEVATRRNQTFRRGDSQKAYQEAFDIAKAKMQPTHPIRLGLALNFSVFYYEIINS 520
           YYRYLAEVA+  ++      SQ++YQEAFDIAK KMQPTHPIRLGLALNFSVF+YEI+N+
Sbjct: 127 YYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNA 186

Query: 519 PCESVPLS 496
           P ++  L+
Sbjct: 187 PDKACQLA 194



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = -1

Query: 719 YLXMKGXTTGTLQKWPPGETRHSVVETLRRPTRKRSTLLKPKC--NRPIQSGLV*RSTFP 546
           YL MKG     L +   G+ R+SVVE  ++  ++   + K K     PI+ GL     F 
Sbjct: 120 YLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLA--LNFS 177

Query: 545 SFITRLSTPPARACHLAKQ 489
            F   +   P +AC LAKQ
Sbjct: 178 VFFYEILNAPDKACQLAKQ 196


>Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical
           protein M117.3 protein.
          Length = 125

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 34/77 (44%), Positives = 47/77 (61%)
 Frame = -3

Query: 699 YYRYLAEVATRRNQTFRRGDSQKAYQEAFDIAKAKMQPTHPIRLGLALNFSVFYYEIINS 520
           ++RYL +     N+      S+ AYQEA  IAK KMQPTHPIRLGLALN S   ++++N 
Sbjct: 5   HFRYLVQYDDI-NREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFDVLNL 63

Query: 519 PCESVPLS*TGFRRCHR 469
           P E+  ++ +     HR
Sbjct: 64  PKEANEIAQSALDSAHR 80


>AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical
           protein Y7A5A.1 protein.
          Length = 538

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 548 PSFITRLSTPPARACHLAKQAFDDAIAELDTLNE 447
           P+F+   +T   R    AKQ F D +  LDTL E
Sbjct: 356 PAFLKFTTTQAVREMTFAKQVFQDIVMPLDTLKE 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,018,932
Number of Sequences: 27780
Number of extensions: 292850
Number of successful extensions: 875
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)