Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_D22
         (849 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA...    32   1.1  
BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p pro...    31   1.5  
AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,...    31   1.5  
AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-P...    31   1.5  
BT015286-1|AAT94515.1|  404|Drosophila melanogaster GH23733p pro...    30   4.6  
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    29   8.1  

>AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA
           protein.
          Length = 588

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 181 PLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRR 291
           PL  +N  EV   PR++L+P  +A P  A+P  P RR
Sbjct: 352 PLTRENSKEVNQRPRTSLRPP-SARPASARPGAPRRR 387


>BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p
           protein.
          Length = 1041

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 5   FFFFSGRGPNLLRGPRANGARGVCETQRSAWCCE 106
           + FF+G   NL+    +N  RG+ + Q SA  CE
Sbjct: 885 YAFFTGAASNLVGNNASNDGRGISQAQTSAGTCE 918


>AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,
           isoform A protein.
          Length = 1041

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 5   FFFFSGRGPNLLRGPRANGARGVCETQRSAWCCE 106
           + FF+G   NL+    +N  RG+ + Q SA  CE
Sbjct: 885 YAFFTGAASNLVGNNASNDGRGISQAQTSAGTCE 918


>AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-PA
           protein.
          Length = 1056

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 24/81 (29%), Positives = 33/81 (40%)
 Frame = +1

Query: 106 ADCGPKDFRAHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 285
           AD  PKD  +   + ++  ++ T  PL   NP +   +P      D   +P D  P  P 
Sbjct: 723 ADNTPKDSSSSGSSSTTTFVNTTPSPLDAGNPFDSATIPAWLRDFD---YP-DVGPGVPF 778

Query: 286 RRIEGSETSAVSVRQPVGPPR 348
                   SA S R P  PPR
Sbjct: 779 DPDNFGTASASSTRNPTNPPR 799


>BT015286-1|AAT94515.1|  404|Drosophila melanogaster GH23733p
           protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = +1

Query: 109 DCGPKDFRAHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSR 288
           D  PKD  +   + ++  ++ T  PL   NP +   +P      D   +P D  P  P  
Sbjct: 122 DNTPKDSSSSGSSSTTTFVNTTPSPLDAGNPFDSATIPAWLRDFD---YP-DVGPGVPFD 177

Query: 289 RIEGSETSAVSVRQPVGPPR 348
                  SA S R P  PPR
Sbjct: 178 PDNFGTASASSTRNPTNPPR 197


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 411 RVPTRQAGSGPAGYSGTPAAPSGRPDGLP 325
           R PTR  G+G +G S  P+ P  +P   P
Sbjct: 329 RKPTRTPGTGSSGGSSKPSKPKRKPTSKP 357


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,985,751
Number of Sequences: 53049
Number of extensions: 680341
Number of successful extensions: 3338
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3332
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)