Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_D22
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                26   0.38 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   4.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   4.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   4.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   8.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   8.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 485 HPLRSPLDLHRGXGRHLQGPGTYGR 559
           HP +  L +  G GRHL G    GR
Sbjct: 198 HPQQHGLGVQNGYGRHLPGHAQMGR 222


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 340 PPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALFTPR 447
           PPR     PG PR   T L      ++RP   F PR
Sbjct: 138 PPRE----PGTPRINFTKLKRHHPRYKRPRTTFEPR 169


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 452 RCRGVNRATGRRCIASRPGRLVLVQ 378
           +CR  +R TG   +++  GRLV+ +
Sbjct: 180 QCRTKHRLTGETRLSATKGRLVITE 204



 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 405  PTRQAGSGPAGYSG 364
            P+RQ GSG  G+ G
Sbjct: 1923 PSRQTGSGHGGHGG 1936


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 402 TRQAGSGPAGYSGTPAAPSGRPDGLPY 322
           T +  S P G+      P G+ +G+PY
Sbjct: 588 TFKYSSQPYGFPERLLLPKGKKEGMPY 614


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 95  WCCEQIAGP 121
           WCC+ + GP
Sbjct: 14  WCCDNLGGP 22


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 402 TRQAGSGPAGYSGTPAAPSGRPDGLPY 322
           T +  S P G+      P G+ +G+PY
Sbjct: 588 TFKYSSQPYGFPERLLLPKGKKEGMPY 614


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -3

Query: 400 PAGWFWSSGVFRDTSGTV 347
           PAGW W    F    G V
Sbjct: 162 PAGWIWGDQGFLKKLGAV 179


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 328 QPVGPPRRCRWCP 366
           +PV PPRR   CP
Sbjct: 336 EPVEPPRRKNNCP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,156
Number of Sequences: 438
Number of extensions: 3696
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)