Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_D17
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...    76   3e-14
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
 Frame = -1

Query: 741 PXGXXXLXXXAXHTGXTPIXGRFTXGGFXNXIQXAVPXTXSXDCXGPCTRPSTHXXXXIC 562
           P     L   A HTG T I GRF+ G   N IQ             P             
Sbjct: 81  PYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYV 140

Query: 561 QHSCDXFVQHRLPXKICDXAIPCNTKSSHSIGLMWWLXAREVLRLRGVLPRDQRW----- 397
                 FV    P K+ D  +PCN K   SIGLMWW+ ARE+L LRG + R   +     
Sbjct: 141 GVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGK 200

Query: 396 DVVVDLFFYR 367
           +++ DL+FYR
Sbjct: 201 EIMPDLYFYR 210


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 489 TKSSHSIGLMWWLXA 445
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,286,400
Number of Sequences: 27780
Number of extensions: 190517
Number of successful extensions: 407
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)