Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_D16
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    33   0.28 
AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical ...    31   1.1  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -2

Query: 721 ALSIXHPPCDFGYINPIINPRSIHXPPPDLTSISI----NPLTPX*KEFAPGLKPPLSSE 554
           A S   PP    Y+NPI  P  ++ P P L+SI I     P  P    + P   PP   +
Sbjct: 438 ATSAPTPPTS--YVNPIPPPAPLNFPMPSLSSIGITQLATPPVPGATSYQPPSFPPQQQQ 495

Query: 553 APSAY 539
              AY
Sbjct: 496 QYGAY 500


>AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical
           protein T05E7.1 protein.
          Length = 474

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 574 KPPLSSEAPSAYLTPSSLGMXKRGFAPLFSSE**ITSFAPY*SSFHAYSAPLLQLTP 404
           KPP     P+    P S GM + G+A + +SE     F  +  ++ AY   L +L P
Sbjct: 182 KPPGKGPFPAVIFIPGSNGMLESGYAAVLASE----GFLTFTFAYFAYKKDLPKLIP 234


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 673 IINPRSIHXPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAP-SAYLTPSSL 521
           I+ PR    P P L  + I+P+     +F P + PP    +P  A   P++L
Sbjct: 522 ILRPRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNL 573


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 673 IINPRSIHXPPPDLTSISINPLTPX*KEFAPGLKPPLSSEAP-SAYLTPSSL 521
           I+ PR    P P L  + I+P+     +F P + PP    +P  A   P++L
Sbjct: 522 ILRPRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNL 573


>U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical
           protein F08F8.9c protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 486 ENKGAKPLLXMPSDEGVR-YADGASDD-NGGFNPGAN 590
           +NK AKPL+ +  DE  R +     +D NGGF+  +N
Sbjct: 187 KNKNAKPLMDIKFDEKARSFKQRTGEDYNGGFDISSN 223


>U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical
           protein F08F8.9a protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 486 ENKGAKPLLXMPSDEGVR-YADGASDD-NGGFNPGAN 590
           +NK AKPL+ +  DE  R +     +D NGGF+  +N
Sbjct: 187 KNKNAKPLMDIKFDEKARSFKQRTGEDYNGGFDISSN 223


>U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical
           protein F08F8.9b protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 486 ENKGAKPLLXMPSDEGVR-YADGASDD-NGGFNPGAN 590
           +NK AKPL+ +  DE  R +     +D NGGF+  +N
Sbjct: 187 KNKNAKPLMDIKFDEKARSFKQRTGEDYNGGFDISSN 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,398,979
Number of Sequences: 27780
Number of extensions: 334950
Number of successful extensions: 939
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)