Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_D07
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 34 0.11
02_02_0063 + 6481568-6481570,6481922-6482470 33 0.33
11_07_0002 - 27171791-27172222 32 0.58
09_02_0279 + 6702517-6702948 32 0.58
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 31 0.77
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 30 1.8
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 30 1.8
05_06_0281 + 26912419-26913099 30 2.3
07_03_0315 - 16674660-16674712,16674966-16675158 29 3.1
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 29 3.1
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 29 3.1
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.1
01_06_0752 + 31704071-31704787 29 4.1
08_01_0966 + 9751198-9751530,9752182-9752337,9753145-9753240,975... 29 5.4
11_02_0062 - 7909343-7909413,7909509-7910974,7911064-7912088,791... 28 7.1
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 7.1
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 28 9.4
08_02_1035 - 23840606-23841109,23841194-23841199 28 9.4
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 28 9.4
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 28 9.4
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 28 9.4
03_06_0199 + 32310272-32311432 28 9.4
02_05_0747 + 31461431-31461688 28 9.4
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 34.3 bits (75), Expect = 0.11
Identities = 35/119 (29%), Positives = 42/119 (35%), Gaps = 10/119 (8%)
Frame = +1
Query: 277 EPSRRIEGSETSAVSVRQPVGPPRRCR-WCPGIPRWTRTSLPGRDAIHRRPVALI---TP 444
+P R S T A S P PPRR W P W T PG+ A P AL TP
Sbjct: 243 DPMRAFPASLTEAAS-SAPAFPPRRPNSWAPSPAPWPYT--PGQQAKFSPPPALYASPTP 299
Query: 445 RQXXXXXXXXXXXXXXXXXXXXXXGGGR------HLQGPGRTGVFPPPAPGSTATDRCG 603
GGGR ++ P R + PPP+P + D G
Sbjct: 300 SPPTFAGGYLQSRLSGETAPMIIPGGGRGPVHNRNMSDPVRGFMLPPPSPKNIRGDSGG 358
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 431 ATGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTG 330
ATGRR A+RPGRLV + + G +R GP G
Sbjct: 130 ATGRRDAATRPGRLVAMAATV-GSRREERRGPAG 162
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 426 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 304
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 426 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 304
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 172 RPIPSEVRTRMR*GGYRGQHYNQTARLTPRXAQP 273
R PSE+R+R R G RG+ Y+Q +PR + P
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPRYSPP 154
>10_08_0495 - 18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 109 PRAQGF*DPPTKRLPXHSYTRRPIPSEVRTRMR*GGYRGQHYN-QTARLTPRXAQPTEPS 285
P + PP ++ P H Y ++ P GG+RGQ+YN + P+ P +P
Sbjct: 816 PHPGHYQQPPHQQPPNHDYGQQAYP---------GGWRGQYYNPHQPQPQPQPPYP-QPP 865
Query: 286 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGR 405
+G + + + V R G+PR + S+ GR
Sbjct: 866 YNAQGLAPAGAGMARRVPTRPRGGGGGGVPR-SEGSIQGR 904
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 116 PKDFRTHPLNDSPXTLTPDVRSPPRSEPG*GRG---ATAVNTTTRRRGSPQGT 265
PK T N +P P R+PP PG G G + ++ RRRG P G+
Sbjct: 24 PKPKPTPIRNPTPPPPPPRRRTPPPPPPGSGPGPQRPSYLSVALRRRGPPAGS 76
>05_06_0281 + 26912419-26913099
Length = 226
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 256 PRXAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRD 408
P + P P+ ++ +R+P GP W PG+P T+T L G D
Sbjct: 89 PPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>07_03_0315 - 16674660-16674712,16674966-16675158
Length = 81
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 428 TGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTGCRTETADVSEPSIRLEGSVG 270
TG + + S GR +L I +R R+G P GC+ + S I L VG
Sbjct: 11 TGEKGVRSGVGRDILRDEKIK--ERKRMGQPAGCQADLLICSPVKINLFSQVG 61
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 316 VSVRQPVGPPRRCRWCPGIPRWTR 387
+ + + V PP R WCP RW R
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGR 24
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 160 SYTRRPIPSEVRTRMR*GGYRGQHYNQT-ARLTPRXAQPTEPSRRIEGSETSAVSVRQPV 336
SY+R P P R G RG+ Y+++ +R R P SR S + S R P
Sbjct: 139 SYSRSPSP-------RRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDS-RSPR 190
Query: 337 GPPRRCRWCPGIPRWTRT 390
G PR R G PR +R+
Sbjct: 191 GSPRDSRSPRGSPRDSRS 208
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 396 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 313
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>01_06_0752 + 31704071-31704787
Length = 238
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 547 RTGVFPPPAPGSTATDRC 600
R GV PPP P STA RC
Sbjct: 159 RAGVEPPPPPPSTAAARC 176
>08_01_0966 +
9751198-9751530,9752182-9752337,9753145-9753240,
9753599-9753719,9754027-9754196
Length = 291
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 253 TPRXAQPTEPSRRIEGSETSAVSVRQPVGPPR-RCRWCPGIPRWTRTSLPG 402
TP P R +A R+P+ PPR RCR G T T+ G
Sbjct: 11 TPPPHSAASPPARHRHPALAAPRSRRPINPPRLRCRAAAGAAATTTTTTGG 61
>11_02_0062 -
7909343-7909413,7909509-7910974,7911064-7912088,
7912300-7912809,7913418-7913441,7913617-7913673
Length = 1050
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +3
Query: 204 EVGGLPRSTLQPDGA--AHPKXRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTP 377
E GG+ R L ++P + A A RRL +G LG + +A P S +TP
Sbjct: 92 ESGGVARRLLARGSLLRSYPARQHAGAAARLARRL--LGSLGRSLPASALLPPYSSASTP 149
Query: 378 LDQNQPAGSGRDT--PSTG 428
L P G T PS G
Sbjct: 150 LLIRLPGGQADSTSAPSLG 168
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 107 DRGPKDFRTHPLNDSPXTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGTPSR 274
DRG R P + P RSP R P + + RR GSP+ +P R
Sbjct: 232 DRGSPPRRRSPPARRERSPAPRSRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPVR 287
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 255 PKXRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGS 404
P+ A + +NRR NVG + V V R+TP+D P G+
Sbjct: 537 PRPGSASQSSRSNRR--NVGSNEDTESECGRLVGTVRRHTPIDTRDPIGA 584
>08_02_1035 - 23840606-23841109,23841194-23841199
Length = 169
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 201 PGSDLGGDRTSGVRVXGESFSGWVLKSLG 115
PG+ GG+RT G V E++ V +LG
Sbjct: 35 PGAGAGGERTGGSAVGAEAWGDGVAAALG 63
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 176 RSPPRSEPG*GRGATAVNTTTRRRGSPQGTPSRRSLRGES 295
R PP+S GRG+ T R P G+P+ S+ G+S
Sbjct: 421 RPPPKSMTK-GRGSDPNETAHRLSKLPDGSPASPSIHGDS 459
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 517 GGGRHLQGPGRTGVFPPPAPGS 582
G HLQ P R + P PAPG+
Sbjct: 102 GAATHLQQPSRMKLSPSPAPGA 123
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 517 GGGRHLQGPGRTGVFPPPAPGS 582
G HLQ P R + P PAPG+
Sbjct: 102 GAATHLQQPSRMKLSPSPAPGA 123
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 78 SHIPRAPLLRGDLVGGSALYPKKKKK 1
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
>02_05_0747 + 31461431-31461688
Length = 85
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 190 VRTRMR*GGYRGQHYNQTARLTPRXAQPTEPSRRIEGSETSAVSVRQPVGPPRR 351
VR R+R GG ++ PR + T+ +R++EG +++A + VG PR+
Sbjct: 14 VRARLRVGGCWVENLRMNLPRRPRASGRTDHARQMEGGKSNAGAY---VGIPRK 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,138,572
Number of Sequences: 37544
Number of extensions: 461543
Number of successful extensions: 1753
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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