Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_D07
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.21
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.21
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 36 0.21
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 36 0.21
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 36 0.21
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 34 0.64
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 33 0.85
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 33 0.85
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 32 2.6
BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein. 31 3.4
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 31 4.5
BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein. 31 6.0
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 27 6.8
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 27 7.6
BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein. 30 7.9
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 30 7.9
AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein. 30 7.9
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 30 7.9
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 78 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.64
Identities = 36/156 (23%), Positives = 50/156 (32%), Gaps = 8/156 (5%)
Frame = +1
Query: 133 PPTKRLPXHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRXAQPTEPSRRIEGSET- 309
P R P T P P T + G R + ++ + R P PSR ++
Sbjct: 207 PGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266
Query: 310 ------SAVSV-RQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALITPRQXXXXXX 468
+ S+ R+ V PP P +P R S P R + P + P
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAPHRPHLRPPPPSRPGPPPLPPSSS 326
Query: 469 XXXXXXXXXXXXXXXXGGGRHLQGPGRTGVFPPPAP 576
L PGR+G PPP P
Sbjct: 327 GNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPVP 362
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.85
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLP 325
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.85
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLP 325
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 307 TSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
T V + Q PP RW P W RT LP R+ RR
Sbjct: 2103 TQRVDLYQQASPPDALRWIP--KPWERTGLPPREGPSRR 2139
>BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein.
Length = 276
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 268 QPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRRPV--ALIT 441
QP P R + G E +R +GP + C+ P +P R SL G+ RP+ L
Sbjct: 166 QPCPPKRPLMGPEQPCQPLRPLMGPNKPCKPQPLLPIPDRPSLLGQPGPPCRPLLGLLCQ 225
Query: 442 PRQ 450
PR+
Sbjct: 226 PRR 228
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 31.1 bits (67), Expect = 4.5
Identities = 35/154 (22%), Positives = 49/154 (31%), Gaps = 8/154 (5%)
Frame = +1
Query: 133 PPTKRLPXHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRXAQPTEPSRRIEGSET- 309
P R P T P P T + G R + ++ + R P PSR ++
Sbjct: 207 PGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266
Query: 310 ------SAVSV-RQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALITPRQXXXXXX 468
+ S+ R+ V PP P +P R S P R + P + P
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAPHRPHLRPPPPSRPGPPPLPPSSS 326
Query: 469 XXXXXXXXXXXXXXXXGGGRHLQGPGRTGVFPPP 570
L PGR+G PPP
Sbjct: 327 GNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPP 360
>BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein.
Length = 134
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 286 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSL 396
R +EG + S VRQPV P R R PG PR + +L
Sbjct: 96 RALEGPQGSEGQVRQPVLPGVRERRVPGQPRRRKAAL 132
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.6 bits (56), Expect(2) = 6.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 420 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 334
+V + PT Q AG GP+G A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 6.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 351 PSGRPDGLPYRDG 313
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 26.6 bits (56), Expect(2) = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 420 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 334
+V + PT Q AG GP+G A SG PD
Sbjct: 52 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 81
Score = 22.2 bits (45), Expect(2) = 7.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 351 PSGRPDGLPYRDG 313
PSG P G PY G
Sbjct: 102 PSGEPPGTPYFSG 114
>BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein.
Length = 132
Score = 30.3 bits (65), Expect = 7.9
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 343 PRRCRWCPGIPRWT--RTSLPGR 405
P RC W PG P T RT+ PGR
Sbjct: 106 PSRCAWSPGFPITTPSRTAFPGR 128
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 465 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 343
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein.
Length = 990
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 465 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 343
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 465 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 343
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 734 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 773
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,722,932
Number of Sequences: 237096
Number of extensions: 2443674
Number of successful extensions: 9112
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9043
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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