Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_D01
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 40 0.002
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 37 0.020
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.047
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.047
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.047
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.44
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.44
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.44
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.44
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.44
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.3
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 30 1.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 1.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 5.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 7.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 9.4
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/101 (26%), Positives = 31/101 (30%), Gaps = 1/101 (0%)
Frame = +2
Query: 482 PXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQ 661
P PP P P P + P A +P P P +P A
Sbjct: 50 PPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLAS-YPQNAVPVPAPPPAPYPQHAVP 108
Query: 662 XPXXPXLXR-EXXXPAPTPSXQXXXXPPXAXLRPXPPPLXP 781
P P + PAP P Q PP P PPP P
Sbjct: 109 APAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYP 149
Score = 32.7 bits (71), Expect = 0.33
Identities = 27/102 (26%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +2
Query: 479 LPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAX 658
+P PP P H P P + P A P P P PPP P
Sbjct: 94 VPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP----PPPHYPPPPPHYP 149
Query: 659 QXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRP-XPPPLXP 781
P P AP P+ PP P PP P
Sbjct: 150 PPPPAPH-SAYIDHSAPRPAYIEHSAPPPQPQYPQQQPPQYP 190
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 36.7 bits (81), Expect = 0.020
Identities = 31/115 (26%), Positives = 32/115 (27%), Gaps = 4/115 (3%)
Frame = +2
Query: 440 HHPXGLXTLXXPXLPXPPXEX----LPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXP 607
HH P P P E P H P P S PP P P
Sbjct: 87 HHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKS--RAGGSSPPPPPPP 144
Query: 608 XTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPP 772
PP SP R P P P+P P PP P PPP
Sbjct: 145 RVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP-----RNPPRTPPSPIPPP 194
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.047
Identities = 26/78 (33%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +2
Query: 545 PGPXXSFPXRAXXXXPPFPXPXTSXPPPXX--SPXSTRAXQXPXXPXLXREXXXPAPTPS 718
P P P PP P P S PPP SP RA P P R P
Sbjct: 257 PPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSPPPPPP-PRGSPPTGSLPP 314
Query: 719 XQXXXXPPXAXLRPXPPP 772
Q PP A PPP
Sbjct: 315 PQAGGSPPPAGTGSPPPP 332
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = +2
Query: 545 PGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQ 724
P P P A PP P S PPP R P P P P P+
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPP-------RTGSPPPPP-----TGSPPPPPAG- 286
Query: 725 XXXXPPXAXLRPXPPP 772
PP A P PPP
Sbjct: 287 GSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.047
Identities = 26/78 (33%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +2
Query: 545 PGPXXSFPXRAXXXXPPFPXPXTSXPPPXX--SPXSTRAXQXPXXPXLXREXXXPAPTPS 718
P P P PP P P S PPP SP RA P P R P
Sbjct: 278 PPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSPPPPPP-PRGSPPTGSLPP 335
Query: 719 XQXXXXPPXAXLRPXPPP 772
Q PP A PPP
Sbjct: 336 PQAGGSPPPAGTGSPPPP 353
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = +2
Query: 545 PGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQ 724
P P P A PP P S PPP R P P P P P+
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPP-------RTGSPPPPP-----TGSPPPPPAG- 307
Query: 725 XXXXPPXAXLRPXPPP 772
PP A P PPP
Sbjct: 308 GSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.047
Identities = 26/78 (33%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +2
Query: 545 PGPXXSFPXRAXXXXPPFPXPXTSXPPPXX--SPXSTRAXQXPXXPXLXREXXXPAPTPS 718
P P P PP P P S PPP SP RA P P R P
Sbjct: 263 PPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSPPPPPP-PRGSPPTGSLPP 320
Query: 719 XQXXXXPPXAXLRPXPPP 772
Q PP A PPP
Sbjct: 321 PQAGGSPPPAGTGSPPPP 338
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = +2
Query: 545 PGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQ 724
P P P A PP P S PPP R P P P P P+
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPP-------RTGSPPPPP-----TGSPPPPPAG- 292
Query: 725 XXXXPPXAXLRPXPPP 772
PP A P PPP
Sbjct: 293 GSPPPPRAGSPPPPPP 308
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +2
Query: 551 PXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXX 730
P + R PP P P PP P A P P P P P+
Sbjct: 164 PRTAASTRTAISAPPPPRPPPQEPP---KPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQ 220
Query: 731 XXPPXAXLR-PXPPPLXP 781
PP A ++ P P P+ P
Sbjct: 221 IAPPPAPVQDPAPAPVEP 238
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/62 (29%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 590 PPFPXPXTSXPP-PXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXP 766
PP P P S P P P + P P P P P + P + P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 767 PP 772
PP
Sbjct: 321 PP 322
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/77 (31%), Positives = 25/77 (32%)
Frame = +2
Query: 542 TPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSX 721
TP P P PP P PPP P R P P + P P PS
Sbjct: 271 TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG-RTPGPPGMPGM-----PPPPPPS- 323
Query: 722 QXXXXPPXAXLRPXPPP 772
PP P PPP
Sbjct: 324 --RFGPPGMGGMPPPPP 338
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/100 (23%), Positives = 26/100 (26%)
Frame = +2
Query: 482 PXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQ 661
P PP + P P P R P P PP P
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 662 XPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPPLXP 781
P P + P P P P + P PPP P
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGP---GMYPPPPPSRP 371
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +2
Query: 446 PXGLXTLXXPXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPP 625
P GL + P PP LP T P P P + PP P P PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPP----ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 626 PXXSPXSTRAXQXPXXP 676
P P P P
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/101 (23%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Frame = +2
Query: 473 PXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTR 652
P +P PP + + + P + PP PPP P T
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 653 AXQXPXXP-XLXREXXXPAPTPSXQXXXXPPXAXLRPXPPP 772
P P L P P P PP P PPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP----PPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +2
Query: 446 PXGLXTLXXPXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPP 625
P GL + P PP LP T P P P + PP P P PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPP----ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 626 PXXSPXSTRAXQXPXXP 676
P P P P
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/101 (23%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Frame = +2
Query: 473 PXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTR 652
P +P PP + + + P + PP PPP P T
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 653 AXQXPXXP-XLXREXXXPAPTPSXQXXXXPPXAXLRPXPPP 772
P P L P P P PP P PPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP----PPPPP 777
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/62 (29%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 590 PPFPXPXTSXPP-PXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXP 766
PP P P S P P P + P P P P P + P + P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 767 PP 772
PP
Sbjct: 331 PP 332
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/77 (31%), Positives = 25/77 (32%)
Frame = +2
Query: 542 TPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSX 721
TP P P PP P PPP P R P P + P P PS
Sbjct: 281 TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG-RTPGPPGMPGM-----PPPPPPS- 333
Query: 722 QXXXXPPXAXLRPXPPP 772
PP P PPP
Sbjct: 334 --RFGPPGMGGMPPPPP 348
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/100 (23%), Positives = 26/100 (26%)
Frame = +2
Query: 482 PXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQ 661
P PP + P P P R P P PP P
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 662 XPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPPLXP 781
P P + P P P P + P PPP P
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGP---GMYPPPPPSRP 381
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +2
Query: 446 PXGLXTLXXPXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPP 625
P GL + P PP LP T P P P + PP P P PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPP----ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 626 PXXSPXSTRAXQXPXXP 676
P P P P
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/101 (23%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Frame = +2
Query: 473 PXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTR 652
P +P PP + + + P + PP PPP P T
Sbjct: 264 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 323
Query: 653 AXQXPXXP-XLXREXXXPAPTPSXQXXXXPPXAXLRPXPPP 772
P P L P P P PP P PPP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP----PPPPP 360
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = +2
Query: 590 PPFPXPXTSXPPPXXSPXST----RAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLR 757
PP T PPP P A + P P P PT Q A R
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRR 157
Query: 758 PXPPP 772
P PPP
Sbjct: 158 PPPPP 162
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Frame = +2
Query: 590 PPFPXPXTSXPPPXXS----PXSTR--AXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAX 751
PP P T PPP + ST A + P P P PT Q A
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYAS 217
Query: 752 LRPXPPP 772
RP PPP
Sbjct: 218 RRPPPPP 224
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = +2
Query: 590 PPFPXPXTSXPPPXXSPXSTRAX----QXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLR 757
PP T PPP P A + P P P PT Q A R
Sbjct: 191 PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRR 250
Query: 758 PXPPP 772
P PPP
Sbjct: 251 PPPPP 255
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 599 PXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPP 772
P P + P S A + P P P PT Q A RP PPP
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 131
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 6/67 (8%)
Frame = +2
Query: 590 PPFPXPXTSXPPPXXS------PXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAX 751
PP P T PPP + A + P P P PT Q A
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNAS 186
Query: 752 LRPXPPP 772
RP PPP
Sbjct: 187 RRPPPPP 193
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = +2
Query: 590 PPFPXPXTSXPPPXXSPXST----RAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLR 757
PP + PPP P A + P P P PT Q A R
Sbjct: 222 PPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRR 281
Query: 758 PXPPP 772
P PPP
Sbjct: 282 PPPPP 286
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +2
Query: 590 PPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPP 769
PP P P + PP +P Q P + PAP + PP P PP
Sbjct: 366 PPKPTPQQA-PPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPP 424
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +2
Query: 599 PXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPPLX 778
P P S PP P ST P + P P+ P A + PPP
Sbjct: 434 PPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 493
Query: 779 P 781
P
Sbjct: 494 P 494
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/103 (23%), Positives = 27/103 (26%)
Frame = +2
Query: 473 PXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTR 652
P PP P H P R PP P P + S+
Sbjct: 398 PKQTPPPTPNAPSHSHQVDQFAEFKLVEPKTPTRVAPPPPPSAPPTIKFPISTGTSYSST 457
Query: 653 AXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPPLXP 781
P P P+PS Q P P PPP P
Sbjct: 458 TPPTTPKPAPPPPSRIPNPSPSPQ----PAEVSKSPPPPPPLP 496
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +2
Query: 599 PXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPPLX 778
P P S PP P ST P + P P+ P A + PPP
Sbjct: 441 PPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 500
Query: 779 P 781
P
Sbjct: 501 P 501
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +2
Query: 593 PFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPP 772
P P P + P P SP + P P P TPS PP P PPP
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPPP----PPLPPIATPSSVPPPPPPP----PPPPP 523
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = +2
Query: 473 PXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTR 652
P PP P H P R PP P P S+
Sbjct: 405 PKQTPPPTPNAPSHSHQVDQFAEFKLVEPKTPTRVAPPPPPSAPPTIKFPISTGPSYSST 464
Query: 653 AXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPPPLXP 781
P P P+PS Q P P PPP P
Sbjct: 465 TPPTTPKPAPPPPSRIPNPSPSPQ----PAEVSKSPPPPPPLP 503
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/104 (25%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = -3
Query: 780 GXXGGGXGLXWAXGGXXXXXXEGVGAGXXXSLXSXGXXGXX*ARVXXGLXXG-GGXEVXG 604
G GGG G GG G G G G G G GG G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG 154
Query: 603 XGNGGXXXXARXGXDXXGPGVXXXXVLXLXWXGRXSXGGXGXXG 472
G GG G G G + G GG G G
Sbjct: 155 CGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/104 (25%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = -3
Query: 780 GXXGGGXGLXWAXGGXXXXXXEGVGAGXXXSLXSXGXXGXX*ARVXXGLXXG-GGXEVXG 604
G GGG G GG G G G G G G GG G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG 154
Query: 603 XGNGGXXXXARXGXDXXGPGVXXXXVLXLXWXGRXSXGGXGXXG 472
G GG G G G + G GG G G
Sbjct: 155 CGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +2
Query: 593 PFPXPXTSXPPPXXSPXSTRAXQXPXX-PXLXREXXXPAPTPSXQXXXXPPXAXLRPXPP 769
P P T PPP + + Q P L R P P Q PP P PP
Sbjct: 717 PTSRPKTPPPPPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPP---PPPP 773
Query: 770 P 772
P
Sbjct: 774 P 774
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +2
Query: 593 PFPXPXTSXPPPXXSPXSTRAXQXPXX-PXLXREXXXPAPTPSXQXXXXPPXAXLRPXPP 769
P P T PPP + + Q P L R P P Q PP P PP
Sbjct: 717 PTSRPKTPPPPPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPP---PPPP 773
Query: 770 P 772
P
Sbjct: 774 P 774
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = +2
Query: 545 PGPXXSFPXRAXXXXPPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPS 718
PGP PP P P S PP P +R + P R AP PS
Sbjct: 71 PGPQGPSDLPGPSGAPPGP-PHPSGPPHRPHPHPSRRPRPTRLPRPSRSPHSDAPEPS 127
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/90 (28%), Positives = 29/90 (32%), Gaps = 9/90 (10%)
Frame = +2
Query: 473 PXLPXPPXEXLPXHXXXXTXXXXTPGPXXSFPXRAXXXXPPFPX-----PXTSXPPPXX- 634
P P PP LP P P S A PP P T+ PPP
Sbjct: 470 PPPPGPPSSLLPL----INTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPM 525
Query: 635 ---SPXSTRAXQXPXXPXLXREXXXPAPTP 715
+P ST A P P + P P P
Sbjct: 526 PGMAPLSTGAPTPPPPPPVGMANGGPPPPP 555
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -3
Query: 780 GXXGGGXGLXWAXGGXXXXXXEGVGAGXXXSLXSXGXXGXX*ARVXXGLXXGGGXEVXGX 601
G GGG G GG G G G S G G GGG G
Sbjct: 788 GGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGG---AGD 844
Query: 600 GNGG 589
GNGG
Sbjct: 845 GNGG 848
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/64 (26%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +2
Query: 593 PFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXX-PAPTPSXQXXXXPPXAXLRPXPP 769
P P P PPP + P P + + P P P P + + P PP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSP--SMILPPPP 1393
Query: 770 PLXP 781
P P
Sbjct: 1394 PPLP 1397
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = -3
Query: 771 GGGXGLXWAXGGXXXXXXEGVGAGXXXSLXSXGXXGXX*ARVXXGLXXGGGXEVXGXGNG 592
GGG G + GG G G G S + G G G GGG G N
Sbjct: 320 GGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNA 379
Query: 591 G 589
G
Sbjct: 380 G 380
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 590 PPFPXPXTSXPPPXXSPXSTRAXQXPXXPXLXREXXXPAPTPSXQXXXXPPXAXLRPXPP 769
PP P PPP P + Q P P R P P PP + P P
Sbjct: 661 PPNIQPPVPHPPPMGFPFQHQLTQLPGQP---RPAGLPPGVPPMFNLNAPPPPGI-PGYP 716
Query: 770 PLXP 781
P P
Sbjct: 717 PAPP 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,441,444
Number of Sequences: 27780
Number of extensions: 168202
Number of successful extensions: 845
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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