Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_C21
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    29   2.8  
L37867-1|AAA63155.1|  319|Caenorhabditis elegans homeodomain pro...    29   4.9  
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    28   8.6  
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    28   8.6  
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -1

Query: 478 LSNERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSK 299
           L N +   FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK
Sbjct: 204 LRNHQLYMFGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSK 263

Query: 298 QCDFTSRVSH--SKRETRRRSP 239
           +   +    H  +K + R RSP
Sbjct: 264 ERSPSQPDIHIVAKPQQRWRSP 285


>L37867-1|AAA63155.1|  319|Caenorhabditis elegans homeodomain
           protein protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +3

Query: 342 LPDSARLASALEAFRHNPADGSFXXXXXXXXXXTKCPKLRFLSL 473
           LPD + ++S+L    HNP   ++          TK PKL  LSL
Sbjct: 37  LPDDS-ISSSLAPLTHNPYAFNYSIPLPPTDITTKLPKLELLSL 79


>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
            protein R11A8.7b protein.
          Length = 2584

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -1

Query: 688  TTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 581
            TTG++ L    W P+  +  A DP+ S  P+ A+  S SV
Sbjct: 2256 TTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -1

Query: 688  TTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 581
            TTG++ L    W P+  +  A DP+ S  P+ A+  S SV
Sbjct: 2278 TTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
            R11A8.7d protein.
          Length = 1427

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -1

Query: 688  TTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 581
            TTG++ L    W P+  +  A DP+ S  P+ A+  S SV
Sbjct: 1099 TTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138


>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
            R11A8.7c protein.
          Length = 1405

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -1

Query: 688  TTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 581
            TTG++ L    W P+  +  A DP+ S  P+ A+  S SV
Sbjct: 1077 TTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
            R11A8.7b protein.
          Length = 2584

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -1

Query: 688  TTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 581
            TTG++ L    W P+  +  A DP+ S  P+ A+  S SV
Sbjct: 2256 TTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -1

Query: 688  TTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 581
            TTG++ L    W P+  +  A DP+ S  P+ A+  S SV
Sbjct: 2278 TTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,348,135
Number of Sequences: 27780
Number of extensions: 363788
Number of successful extensions: 1045
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)