Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_C03
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 87 1e-17
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 87 1e-17
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 87 1e-17
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 87 1e-17
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 87 1e-17
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 87 1e-17
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 87 1e-17
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 31 0.91
Z81562-6|CAB04554.1| 211|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ... 28 6.4
AF077532-1|AAC26268.1| 301|Caenorhabditis elegans Hypothetical ... 28 6.4
Z83122-2|CAB05599.1| 155|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 745 FVPKNTXPKXLRSFNNRSKENRRXDKISAGPQSHILEGVTWDEASKMVGEDAVNT----H 578
F P ++ PK + KEN R +SAGPQS IL+ VT+++ + ++ D T
Sbjct: 476 FSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGTVGQSS 535
Query: 577 TGDHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 416
T D +L+G ASKGII R +QH+A VY YA NPF TD +I +Y V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 745 FVPKNTXPKXLRSFNNRSKENRRXDKISAGPQSHILEGVTWDEASKMVGEDAVNT----H 578
F P ++ PK + KEN R +SAGPQS IL+ VT+++ + ++ D T
Sbjct: 476 FSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGTVGQSS 535
Query: 577 TGDHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 416
T D +L+G ASKGII R +QH+A VY YA NPF TD +I +Y V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 745 FVPKNTXPKXLRSFNNRSKENRRXDKISAGPQSHILEGVTWDEASKMVGEDAVNT----H 578
F P ++ PK + KEN R +SAGPQS IL+ VT+++ + ++ D T
Sbjct: 476 FSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGTVGQSS 535
Query: 577 TGDHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 416
T D +L+G ASKGII R +QH+A VY YA NPF TD +I +Y V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 745 FVPKNTXPKXLRSFNNRSKENRRXDKISAGPQSHILEGVTWDEASKMVGEDAVNT----H 578
F P ++ PK + KEN R +SAGPQS IL+ VT+++ + ++ D T
Sbjct: 476 FSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGTVGQSS 535
Query: 577 TGDHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 416
T D +L+G ASKGII R +QH+A VY YA NPF TD +I +Y V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 745 FVPKNTXPKXLRSFNNRSKENRRXDKISAGPQSHILEGVTWDEASKMVGEDAVNT----H 578
F P ++ PK + KEN R +SAGPQS IL+ VT+++ + ++ D T
Sbjct: 476 FSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGTVGQSS 535
Query: 577 TGDHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 416
T D +L+G ASKGII R +QH+A VY YA NPF TD +I +Y V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 745 FVPKNTXPKXLRSFNNRSKENRRXDKISAGPQSHILEGVTWDEASKMVGEDAVNT----H 578
F P ++ PK + KEN R +SAGPQS IL+ VT+++ + ++ D T
Sbjct: 476 FSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGTVGQSS 535
Query: 577 TGDHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 416
T D +L+G ASKGII R +QH+A VY YA NPF TD +I +Y V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = -1
Query: 745 FVPKNTXPKXLRSFNNRSKENRRXDKISAGPQSHILEGVTWDEASKMVGEDAVNT----H 578
F P ++ PK + KEN R +SAGPQS IL+ VT+++ + ++ D T
Sbjct: 476 FSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGTVGQSS 535
Query: 577 TGDHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 416
T D +L+G ASKGII R +QH+A VY YA NPF TD +I +Y V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 457 DNEIDEYRRDVERKRRGNEYDTDLSESEAISAAQ 356
D E +E +D E K R + DTDLSES + S ++
Sbjct: 692 DEEKEEAGKDAEEKVREGDSDTDLSESSSSSDSE 725
>Z81562-6|CAB04554.1| 211|Caenorhabditis elegans Hypothetical
protein K03D7.9 protein.
Length = 211
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 244 PLLVGFGPALAWSLFSKLGVRRATPLLSRRGRWPVTSS 357
P+ GF P L W L V+R L + +W VT S
Sbjct: 20 PISSGFSPGLVWFLSGTAAVQRFVILYISKYKWLVTGS 57
>Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical
protein T24F1.2 protein.
Length = 588
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Frame = -1
Query: 733 NTXPKXLRSFNN-------RSKENRRX-DKISAGPQSHILEGVTWDEASKMVGEDAVNTH 578
N+ P LR N RS+EN+ P +H+ E + WD++ M + +
Sbjct: 392 NSSPPLLREITNGPVWSAMRSRENKENMQSYQTKPNNHV-ESMDWDDSESMAAQSVAQST 450
Query: 577 TGDHVVLMGAASKGIIQR 524
H G S+ I +R
Sbjct: 451 RSSH-FKPGLLSRNINER 467
>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
protein Y39A1B.2 protein.
Length = 1003
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = -1
Query: 712 RSFNNRSKENRRXDKIS------AGPQSHILEGVTWDEASKMVGEDAV 587
RSF NRS + +IS +G +H+L GVT D+ ++ G A+
Sbjct: 189 RSFLNRSIDEMTLSQISDAIQFDSGGMTHLLGGVTLDDDKRIAGAKAM 236
>AF077532-1|AAC26268.1| 301|Caenorhabditis elegans Hypothetical
protein F40B1.1 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 256 QPEVVLSDVDTTDFLN-AERAHVDSTRGDHTVNGDHSDAHQSTFS 125
Q EV L D+D TDF N E + + D T++G AH S
Sbjct: 190 QKEVTLQDIDPTDFQNLLEVLYGEPAIDDETIDGILHLAHMYDMS 234
>Z83122-2|CAB05599.1| 155|Caenorhabditis elegans Hypothetical
protein R11A5.3 protein.
Length = 155
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -1
Query: 547 ASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERKRRGNEYD 395
AS GII+R + N SAP P I EI R RR E+D
Sbjct: 19 ASDGIIKRPIEGNKKRLSAPIKDKPEHRIAPEEITN-APTTSRLRRAPEFD 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,510,540
Number of Sequences: 27780
Number of extensions: 229740
Number of successful extensions: 926
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -