Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_C02
(785 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 75 1e-13
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 69 5e-12
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 69 5e-12
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 62 8e-10
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 62 8e-10
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 56 4e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 56 4e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 54 2e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 46 8e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 42 7e-04
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 42 7e-04
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 42 7e-04
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 42 0.001
BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p pro... 32 1.0
AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA... 32 1.0
BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p pro... 31 1.8
AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcriptio... 31 1.8
AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p pro... 31 1.8
AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related ... 31 1.8
AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-P... 31 1.8
AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-P... 31 1.8
U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein. 30 4.1
AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p pro... 30 4.1
AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA ... 30 4.1
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 5.4
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 5.4
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 5.4
AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA... 29 5.4
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 5.4
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 5.4
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 5.4
AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p pro... 29 7.2
AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p pro... 29 7.2
AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD... 29 7.2
AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB... 29 7.2
BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p pro... 29 9.5
BT001647-1|AAN71402.1| 573|Drosophila melanogaster RE43027p pro... 29 9.5
AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5 prec... 29 9.5
AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p pro... 29 9.5
AL031583-10|CAA20900.1| 504|Drosophila melanogaster EG:34F3.1 p... 29 9.5
AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-P... 29 9.5
AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-P... 29 9.5
AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-P... 29 9.5
AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-P... 29 9.5
AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-P... 29 9.5
AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-P... 29 9.5
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 74.9 bits (176), Expect = 1e-13
Identities = 42/124 (33%), Positives = 62/124 (50%)
Frame = -1
Query: 677 SRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRN 498
SRSKLSL NK+T+YK + P Y ++ A +H+K +Q IQ++ R+ G WF+RN
Sbjct: 782 SRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRN 841
Query: 497 VXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVI 318
+ S R+ ++ RH N L A P R +N RR+P+ +I
Sbjct: 842 TTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNRSRP---PRRLN-RRQPRDLI 897
Query: 317 TDPP 306
T P
Sbjct: 898 TRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 69.3 bits (162), Expect = 5e-12
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = -1
Query: 677 SRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRN 498
+RS LSL K LY + ++P+ TY S ++ +A+R+++ +Q QSR RI GAPW+LRN
Sbjct: 773 ARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRN 832
Query: 497 VXXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 396
+ + ++ EK H NPL
Sbjct: 833 ENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 69.3 bits (162), Expect = 5e-12
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = -1
Query: 677 SRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRN 498
+RS LSL K LY + ++P+ TY S ++ +A+R+++ +Q QSR RI GAPW+LRN
Sbjct: 773 ARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRN 832
Query: 497 VXXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 396
+ + ++ EK H NPL
Sbjct: 833 ENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 62.1 bits (144), Expect = 8e-10
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = -1
Query: 674 RSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNV 495
R+KLSL KV +YK+ + P + Y V+ AA++HL ++++Q++ R GAPW++R
Sbjct: 788 RNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTR 847
Query: 494 XXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAGNYIPDPVD-RMVNRRRRPKHVI 318
LQ+ + ++ E+ H N L G D R +RR +H
Sbjct: 848 DIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHP 907
Query: 317 TDPPD 303
D P+
Sbjct: 908 HDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 62.1 bits (144), Expect = 8e-10
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = -1
Query: 674 RSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNV 495
R+KLSL KV +YK+ + P + Y V+ AA++HL ++++Q++ R GAPW++R
Sbjct: 590 RNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTR 649
Query: 494 XXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAGNYIPDPVD-RMVNRRRRPKHVI 318
LQ+ + ++ E+ H N L G D R +RR +H
Sbjct: 650 DIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHP 709
Query: 317 TDPPD 303
D P+
Sbjct: 710 HDLPN 714
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 56.4 bits (130), Expect = 4e-08
Identities = 20/56 (35%), Positives = 38/56 (67%)
Frame = -1
Query: 674 RSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWF 507
+SKLS+ NK+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++ + P++
Sbjct: 808 KSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYY 863
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 56.4 bits (130), Expect = 4e-08
Identities = 20/56 (35%), Positives = 38/56 (67%)
Frame = -1
Query: 674 RSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWF 507
+SKLS+ NK+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++ + P++
Sbjct: 756 KSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYY 811
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 54.4 bits (125), Expect = 2e-07
Identities = 23/60 (38%), Positives = 40/60 (66%)
Frame = -1
Query: 677 SRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRN 498
S S LSL +KV LY + ++P+ TY S ++ +A+ +++ +Q QS+ R GAPW++R+
Sbjct: 775 SGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRS 834
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 45.6 bits (103), Expect = 8e-05
Identities = 21/93 (22%), Positives = 45/93 (48%)
Frame = -1
Query: 674 RSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWFLRNV 495
+S ++LR K +Y C+ P+ Y ++ AA+++ +QV+Q+R R P+++R
Sbjct: 789 KSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGT 848
Query: 494 XXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 396
+ + + R+ ++ RH + L
Sbjct: 849 TLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 42.3 bits (95), Expect = 7e-04
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = -1
Query: 671 SKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNV 495
S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A + R
Sbjct: 847 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 906
Query: 494 XXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ AS R+ HENPLI + Y P+ ++ NR
Sbjct: 907 DIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 42.3 bits (95), Expect = 7e-04
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = -1
Query: 671 SKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNV 495
S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A + R
Sbjct: 847 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 906
Query: 494 XXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ AS R+ HENPLI + Y P+ ++ NR
Sbjct: 907 DIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 42.3 bits (95), Expect = 7e-04
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = -1
Query: 671 SKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNV 495
S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A + R
Sbjct: 847 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 906
Query: 494 XXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ AS R+ HENPLI + Y P+ ++ NR
Sbjct: 907 DIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 41.9 bits (94), Expect = 0.001
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = -1
Query: 671 SKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPWFLRNV 495
S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A + R
Sbjct: 400 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 459
Query: 494 XXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ AS R+ HENPLI + Y P+ ++ NR
Sbjct: 460 DIRTKYNIKSFDETFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 512
>BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p
protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 402 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 259
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 77 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 128
>AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA
protein.
Length = 602
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 402 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 259
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 184 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 235
>BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p
protein.
Length = 751
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 285 RHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLLSGS 163
+H +H + SSS+P LAT G S T + ++ L+SGS
Sbjct: 382 QHLQHNNSSSSSPKLATPGDNSGNTSSYQQ-QYASQLVSGS 421
>AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcription
factor kay-beta protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 181
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p
protein.
Length = 546
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 181
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related
antigen protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 181
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-PE,
isoform E protein.
Length = 617
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 181
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 377 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 416
>AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-PB,
isoform B protein.
Length = 546
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 181
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-PA,
isoform A protein.
Length = 595
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 181
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-PD,
isoform D protein.
Length = 722
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 181
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 482 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 521
>U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein.
Length = 724
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 423 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 247
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 100 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 159
Query: 246 SLATKGSTSELTHR-HS 199
S + + SE R HS
Sbjct: 160 SGSAQSDRSESRSRSHS 176
>AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 423 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 247
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 246 SLATKGSTSELTHR-HS 199
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 423 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 247
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 246 SLATKGSTSELTHR-HS 199
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 417 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 467
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA
protein.
Length = 1561
Score = 29.5 bits (63), Expect = 5.4
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -3
Query: 282 HHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSPDLLSGS----RFRXRW*IQRSTALA 118
HH H S S+ N +T GS S + + S SP SGS + R IQ T+
Sbjct: 475 HHSHNSSSTDNTETSTSGSASSPSKSLKTSSSLSPAKRSGSESPKNAKARVHIQSRTSTT 534
Query: 117 RVSVSNSPVEPRE 79
S N ++P +
Sbjct: 535 PSSRINQHLQPSQ 547
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 219 ELTH 208
+H
Sbjct: 216 RRSH 219
>AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 219 ELTH 208
+H
Sbjct: 216 RRSH 219
>AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD,
isoform D protein.
Length = 426
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 70 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 128
Query: 219 ELTH 208
+H
Sbjct: 129 RRSH 132
>AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB,
isoform B protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 219 ELTH 208
+H
Sbjct: 216 RRSH 219
>BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p
protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>BT001647-1|AAN71402.1| 573|Drosophila melanogaster RE43027p
protein.
Length = 573
Score = 28.7 bits (61), Expect = 9.5
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSPD 178
NG P S K + S S + + R H+S SS +G TS L R SP+ D
Sbjct: 423 NGSPLGSAKRKSSSPSSSPSKSKRSTSHKSSSS-------RGKTSSLRSRSRSPVFMDVD 475
Query: 177 LLSGSRFR---XRW*IQRSTALARVSVSNSPVEPREL 76
L +G R + R S LA S+ S P++L
Sbjct: 476 LRTGVRSKSPESRAVAPSSLPLAGASLPASAKAPKDL 512
>AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5
precursor protein.
Length = 917
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 689 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 732
>AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p
protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 160
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AL031583-10|CAA20900.1| 504|Drosophila melanogaster EG:34F3.1
protein.
Length = 504
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 282 HHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSPDLLSGS 163
HH H S S+ N +T GS S + + S SP SGS
Sbjct: 436 HHSHNSSSTDNTETSTSGSASSPSKSLKTSSSLSPAKRSGS 476
>AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-PE,
isoform E protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 160
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-PD,
isoform D protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 160
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-PA,
isoform A protein.
Length = 856
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HKHRSPSSSNPSLATKGSTS--ELTHRHSPLSFSPDL-LSGSR 160
+K S SSS+PSLA +TS ++ ++SP ++ P+ LS SR
Sbjct: 230 NKRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPNCELSRSR 272
>AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-PB,
isoform B protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-PA,
isoform A protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-PA
protein.
Length = 1945
Score = 28.7 bits (61), Expect = 9.5
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSPD 178
NG P S K + S S + + R H+S SS +G TS L R SP+ D
Sbjct: 423 NGSPLGSAKRKSSSPSSSPSKSKRSTSHKSSSS-------RGKTSSLRSRSRSPVFMDVD 475
Query: 177 LLSGSRFR---XRW*IQRSTALARVSVSNSPVEPREL 76
L +G R + R S LA S+ S P++L
Sbjct: 476 LRTGVRSKSPESRAVAPSSLPLAGASLPASAKAPKDL 512
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,622,040
Number of Sequences: 53049
Number of extensions: 747065
Number of successful extensions: 2372
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2309
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -