Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_B19
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.4
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 1.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.1
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 5.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.5
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 9.5
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +2
Query: 590 RPXPTTPXRXPXPSSXP---XXXXXPPXPXXXXP-XNPXTXHPLXPXPPA 727
+P P P R P PS P PP P P P + P P PPA
Sbjct: 464 KPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPA 513
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPP-XPXXXXPXNP--XTXHPLXPXPP 724
P VP P + P R P P + P PP P P NP P+ P PP
Sbjct: 144 PRVPRTPPPRSPPPRRP-PMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P P R P P P PP P P + L P PP
Sbjct: 34 PLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPP 84
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +3
Query: 483 APHXPXXPXXNXXXPAACXXPPPPXXXKXXPXSXXXDXXXPPP 611
AP+ P P P + PPPP P S PPP
Sbjct: 500 APNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPP 542
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPPA 727
P P P P R P P S PP P P P P PP+
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPPA 727
P P P P R P P S PP P P P P PP+
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = -1
Query: 722 GXXGXGGAGXGDXXEXXXPXGEGGASFXVXKRXXVGVWGWXXXVGXXGPWXSFXPGGRGG 543
G G GG G G GG + G WG G G W GGRGG
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGGRGGGDWG-GNNGGGGNWGGNG--GGRGDWGGNGGGGRGG 98
Query: 542 XXTGRXG 522
G G
Sbjct: 99 GGRGDWG 105
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P P P P P PP P P + P P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P P P P P PP P P + P P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 590 RPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
+P P P R P PS P P P P P PP
Sbjct: 471 KPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 515
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXP--XNPXTXHPLXPXPP 724
P P P P + P PS P P P P P + P P PP
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P P P P P PP P P + P P PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.1 bits (62), Expect = 4.1
Identities = 28/90 (31%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Frame = -1
Query: 722 GXXGXGGAGXGDXXEXXXPXGEGGASFXVXKRXXVGVWGWXXXVGXXGPWXSFXPGGRGG 543
G G GG G G P G G + + G GW G F GGRGG
Sbjct: 25 GGPGFGGPGSGGPG----PRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGG 80
Query: 542 XXTGRXGXAVXXGXVWXMRSG-XGXRXGRG 456
G G G +R G G R G G
Sbjct: 81 GRGGNGGFGDNGG----LRGGNGGGRGGNG 106
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/89 (25%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Frame = -1
Query: 722 GXXGXGGAGXGDXXEXXXPXGEGGASFXVXKRXXVGVWGWXXXV--GXXGPWXSFXPGGR 549
G G GG G+ +GG + + G GW G G W GG+
Sbjct: 131 GQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQ 190
Query: 548 GGXXTGRXGXAVXXGXVWXMRSGXGXRXG 462
GG G G G G G G
Sbjct: 191 GGNQGGGGGRGGNQGGEQGGWGGQGGSQG 219
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 593 PXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P P PS P P P P P P PP
Sbjct: 229 PGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 557 GGRGGXXTGRXGXAVXXGXVWXMRSGXGXRXGRG 456
GGRGG GR G G R G G GRG
Sbjct: 299 GGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRG 332
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P T P P+ P PP P P P P P PP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSP-----PPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P T P P+ P PP P P P P P PP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSP-----PPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 572 PXVPXXRPXPTTPXRXPXPSSXPXXXXXPPXPXXXXPXNPXTXHPLXPXPP 724
P P P T P P+ P PP P P P P P PP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSP-----PPPPAGGSPPPPRAGSPPPPPPP 309
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = +2
Query: 581 PXXRPXPTTPXRXPXPSSXPXXXXXPPX----PXXXXPXNPXTXHPLXPXPP 724
P P P P P P P PP P P P P+ P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,803,949
Number of Sequences: 27780
Number of extensions: 130557
Number of successful extensions: 831
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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