Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_B07
         (863 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.                  31   7.2  
M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.                  31   7.2  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   7.2  

>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
          Length = 1270

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 28/137 (20%), Positives = 39/137 (28%), Gaps = 5/137 (3%)
 Frame = +2

Query: 425  PPXXAXSPPRXXXXXXX-----TPSWLSSLXPXXAXLSXPXPXXXXXXPXXLXXXPXFXX 589
            PP    SPP             +P   + + P  +  + P P      P      P    
Sbjct: 972  PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP-PTTTPSPPPTTTTTPPPTT 1030

Query: 590  XPPXPYXXSPXXXXRXXXXPAXXXXETSPLXXXAPPXXXTLSIPQPITXXXLPRXXAXTS 769
             P  P   +P         P      +SP+     P   T++ P P T    P     T 
Sbjct: 1031 TPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTP 1090

Query: 770  EPXXSPXXPFXXXXXPS 820
                +P  P      PS
Sbjct: 1091 SSTTTPSPPPTTMTTPS 1107


>M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.
          Length = 573

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 28/137 (20%), Positives = 39/137 (28%), Gaps = 5/137 (3%)
 Frame = +2

Query: 425 PPXXAXSPPRXXXXXXX-----TPSWLSSLXPXXAXLSXPXPXXXXXXPXXLXXXPXFXX 589
           PP    SPP             +P   + + P  +  + P P      P      P    
Sbjct: 255 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP-PTTTPSPPPTTTTTPPPTT 313

Query: 590 XPPXPYXXSPXXXXRXXXXPAXXXXETSPLXXXAPPXXXTLSIPQPITXXXLPRXXAXTS 769
            P  P   +P         P      +SP+     P   T++ P P T    P     T 
Sbjct: 314 TPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTP 373

Query: 770 EPXXSPXXPFXXXXXPS 820
               +P  P      PS
Sbjct: 374 SSTTTPSPPPTTMTTPS 390


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 28/137 (20%), Positives = 39/137 (28%), Gaps = 5/137 (3%)
 Frame = +2

Query: 425  PPXXAXSPPRXXXXXXX-----TPSWLSSLXPXXAXLSXPXPXXXXXXPXXLXXXPXFXX 589
            PP    SPP             +P   + + P  +  + P P      P      P    
Sbjct: 1597 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP-PTTTPSPPPTTTTTPPPTT 1655

Query: 590  XPPXPYXXSPXXXXRXXXXPAXXXXETSPLXXXAPPXXXTLSIPQPITXXXLPRXXAXTS 769
             P  P   +P         P      +SP+     P   T++ P P T    P     T 
Sbjct: 1656 TPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTP 1715

Query: 770  EPXXSPXXPFXXXXXPS 820
                +P  P      PS
Sbjct: 1716 SSTTTPSPPPTTMTTPS 1732


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,113,957
Number of Sequences: 237096
Number of extensions: 881012
Number of successful extensions: 1649
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)