Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_B06
(858 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 66 4e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 65 1e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 65 1e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 57 3e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 57 4e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 56 5e-08
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 56 5e-08
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 43 5e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 43 5e-04
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 37 0.041
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 36 0.054
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 36 0.054
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 36 0.054
AE014298-1046|AAG22412.1| 667|Drosophila melanogaster CG11369-P... 30 4.7
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 66.5 bits (155), Expect = 4e-11
Identities = 38/108 (35%), Positives = 56/108 (51%)
Frame = -3
Query: 697 YXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 518
Y + P Y ++ A +HI +Q +Q++ RL G WFVRN LH DL L ++
Sbjct: 795 YKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVF 854
Query: 517 KHMKLVSERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLT 374
+ S RY D+ RH NRL +A + S P +RR+PR ++T
Sbjct: 855 DEINKHSSRYHDRLERHRNRL-ASALNRSRPPRRL---NRRQPRDLIT 898
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.3 bits (152), Expect = 1e-10
Identities = 28/81 (34%), Positives = 51/81 (62%)
Frame = -3
Query: 697 YXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 518
Y + ++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ +
Sbjct: 786 YNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVI 845
Query: 517 KHMKLVSERYFDKAMRHDNRL 455
+ + +Y +K H N L
Sbjct: 846 EVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 65.3 bits (152), Expect = 1e-10
Identities = 28/81 (34%), Positives = 51/81 (62%)
Frame = -3
Query: 697 YXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 518
Y + ++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ +
Sbjct: 786 YNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVI 845
Query: 517 KHMKLVSERYFDKAMRHDNRL 455
+ + +Y +K H N L
Sbjct: 846 EVIAEKKTKYNEKLTTHTNPL 866
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 57.2 bits (132), Expect = 3e-08
Identities = 23/70 (32%), Positives = 44/70 (62%)
Frame = -3
Query: 697 YXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 518
Y + ++P+ TY S ++ +A+ ++ID +Q QS+ R GAPW+VR+ ++ DL + S+
Sbjct: 788 YNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
Query: 517 KHMKLVSERY 488
+ + E+Y
Sbjct: 848 NAITELKEKY 857
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 56.8 bits (131), Expect = 4e-08
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = -3
Query: 697 YXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 518
Y C+ P+ Y ++ AA+++ + +Q LQ+R R P++VR LH DL L ++
Sbjct: 801 YVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVE 860
Query: 517 KHMKLVSERYFDKAMRHDNRL 455
+ + + RY D+ RH + L
Sbjct: 861 EQISRHTSRYSDRLRRHHSIL 881
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 56.4 bits (130), Expect = 5e-08
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = -3
Query: 715 GTR*HFYXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDL 536
G + + Y + + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+ DL
Sbjct: 794 GCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDL 853
Query: 535 GLESIRKHMKLVSERYFDKAMRHDNRLIVAAADYS-PNPDHAGASHRRRPRH 383
+ + ++ ++++Y ++ H N L + N D RR RH
Sbjct: 854 KVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 905
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 56.4 bits (130), Expect = 5e-08
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = -3
Query: 715 GTR*HFYXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDL 536
G + + Y + + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+ DL
Sbjct: 596 GCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDL 655
Query: 535 GLESIRKHMKLVSERYFDKAMRHDNRLIVAAADYS-PNPDHAGASHRRRPRH 383
+ + ++ ++++Y ++ H N L + N D RR RH
Sbjct: 656 KVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 707
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = -3
Query: 697 YXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 518
+ T P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++ ++
Sbjct: 820 FKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQ 879
Query: 517 KHMK 506
+ ++
Sbjct: 880 QKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = -3
Query: 697 YXTCIRPVMTYASVVFVHAARTHIDTLQFLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 518
+ T P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++ ++
Sbjct: 768 FKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQ 827
Query: 517 KHMK 506
+ ++
Sbjct: 828 QKIQ 831
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.041
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = -3
Query: 727 NVPSGTR*HFYXTCIRPVMTYASVVFVH-AARTHIDTLQFLQSRFCRLAVGAPWFVRNVD 551
++P + + + P+ YA ++ + T +Q +++++ R + A + R D
Sbjct: 401 HLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQAD 460
Query: 550 LHDDLGLESIRKHMKLVSERYFDKAMRHDNRLI--VAAADYSPN 425
+ ++S + S+RY + H+N LI + Y PN
Sbjct: 461 IRTKYNIKSFDETFDKASQRYANSLTDHENPLIYDLLINAYKPN 504
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.054
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = -3
Query: 727 NVPSGTR*HFYXTCIRPVMTYASVVFVH-AARTHIDTLQFLQSRFCRLAVGAPWFVRNVD 551
++P + + + P+ YA ++ + T +Q +++++ R + A + R D
Sbjct: 848 HLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQAD 907
Query: 550 LHDDLGLESIRKHMKLVSERYFDKAMRHDNRLI--VAAADYSPN 425
+ ++S + S+RY + H+N LI + Y PN
Sbjct: 908 IRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.054
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = -3
Query: 727 NVPSGTR*HFYXTCIRPVMTYASVVFVH-AARTHIDTLQFLQSRFCRLAVGAPWFVRNVD 551
++P + + + P+ YA ++ + T +Q +++++ R + A + R D
Sbjct: 848 HLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQAD 907
Query: 550 LHDDLGLESIRKHMKLVSERYFDKAMRHDNRLI--VAAADYSPN 425
+ ++S + S+RY + H+N LI + Y PN
Sbjct: 908 IRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.054
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = -3
Query: 727 NVPSGTR*HFYXTCIRPVMTYASVVFVH-AARTHIDTLQFLQSRFCRLAVGAPWFVRNVD 551
++P + + + P+ YA ++ + T +Q +++++ R + A + R D
Sbjct: 848 HLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQAD 907
Query: 550 LHDDLGLESIRKHMKLVSERYFDKAMRHDNRLI--VAAADYSPN 425
+ ++S + S+RY + H+N LI + Y PN
Sbjct: 908 IRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AE014298-1046|AAG22412.1| 667|Drosophila melanogaster CG11369-PA
protein.
Length = 667
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 67 SPGQVGEQRLS--QEGGDLLTTARAPPKETLQLKSNCFANESTTGSESRPTEKIR 225
SP V Q+L+ Q+ L R+PP +TL +K+ T + S+P+EKI+
Sbjct: 291 SPSPVRSQKLTSVQKASQAL---RSPPHKTLNVKNQRIRAGDTKMATSKPSEKIK 342
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,712,381
Number of Sequences: 53049
Number of extensions: 612014
Number of successful extensions: 1545
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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