BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_B02
(772 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for ... 30 8.0
X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein. 30 8.0
X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein. 30 8.0
M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein. 30 8.0
CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein. 30 8.0
AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands. ... 30 8.0
>Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for
acrosin (EC 3.4.21.10). ).
Length = 421
Score = 30.3 bits (65), Expect = 8.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 642 PPSXXXXXXXXPPGXPXPXPPPXXXXXXXPPP 737
PP PP P P PPP PPP
Sbjct: 336 PPRPPAAQPRPPPSPPPPPPPPASPLPPPPPP 367
>X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein.
Length = 421
Score = 30.3 bits (65), Expect = 8.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 642 PPSXXXXXXXXPPGXPXPXPPPXXXXXXXPPP 737
PP PP P P PPP PPP
Sbjct: 336 PPRPPAAQPPPPPSPPPPPPPPASPLPPPPPP 367
>X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein.
Length = 421
Score = 30.3 bits (65), Expect = 8.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 642 PPSXXXXXXXXPPGXPXPXPPPXXXXXXXPPP 737
PP PP P P PPP PPP
Sbjct: 336 PPRPPAAQPPPPPSPPPPPPPPASPLPPPPPP 367
>M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein.
Length = 184
Score = 30.3 bits (65), Expect = 8.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 642 PPSXXXXXXXXPPGXPXPXPPPXXXXXXXPPP 737
PP PP P P PPP PPP
Sbjct: 99 PPRPPAAQPPPPPSPPPPPPPPASPLPPPPPP 130
>CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein.
Length = 421
Score = 30.3 bits (65), Expect = 8.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 642 PPSXXXXXXXXPPGXPXPXPPPXXXXXXXPPP 737
PP PP P P PPP PPP
Sbjct: 336 PPRPPAAQPRPPPSPPPPPPPPASPLPPPPPP 367
>AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands.
).).
Length = 232
Score = 30.3 bits (65), Expect = 8.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 642 PPSXXXXXXXXPPGXPXPXPPPXXXXXXXPPP 737
PP PP P P PPP PPP
Sbjct: 147 PPRPPAAQPRPPPSPPPPPPPPPSPLPPPPPP 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,853,007
Number of Sequences: 237096
Number of extensions: 766370
Number of successful extensions: 6734
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5683
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -