Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_A24
         (839 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated prot...    27   4.4  
Z34276-1|CAA84030.1|   94|Homo sapiens mucin protein.                  30   9.1  

>AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated protein
           protein.
          Length = 165

 Score = 26.6 bits (56), Expect(2) = 4.4
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 583 PVR*DVPVRSCLAMRRCSGSAGGC 512
           PV   VP  SC +   C GS GGC
Sbjct: 44  PVCCCVPACSCSSCGSCGGSKGGC 67



 Score = 23.4 bits (48), Expect(2) = 4.4
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -2

Query: 535 CSGSAGGCRFFR*SACLCVLDKC 467
           C GS GGC     S C C    C
Sbjct: 80  CGGSKGGCGSCGCSQCSCYKPCC 102


>Z34276-1|CAA84030.1|   94|Homo sapiens mucin protein.
          Length = 94

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = +1

Query: 439 TPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASP-----DTNAPERLILQVTTTSDV 603
           T T+  PT +T  A T++  +  T      P T  SP      T+AP       +TTS +
Sbjct: 34  TSTISVPTTSTTSASTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSASTTSTI 93

Query: 604 S 606
           S
Sbjct: 94  S 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,051,227
Number of Sequences: 237096
Number of extensions: 2594207
Number of successful extensions: 7736
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7665
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)