Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_A13
(770 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 3.5
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 3.5
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 28 5.5
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 28 5.5
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 28 5.5
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 28 5.5
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 6.0
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 6.0
BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 31 6.0
BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 31 6.0
BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 31 6.0
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 6.0
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 6.0
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 6.0
AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 31 6.0
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 30 8.0
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 30 8.0
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.5 bits (68), Expect = 3.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 597 PXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSXSXXXPXXXPP 728
P P PPP L PP P S P P P PP
Sbjct: 108 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP 151
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.5 bits (68), Expect = 3.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 597 PXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSXSXXXPXXXPP 728
P P PPP L PP P S P P P PP
Sbjct: 653 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP 696
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 28.3 bits (60), Expect(2) = 5.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +3
Query: 603 PXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSXSXXXPXXXPPXXXTXXAPXTP 761
P PP P + + P PG + P P S P PP + P P
Sbjct: 680 PPPPLPEGVGIPSPSSLPGGTAIP-PPPPLPGSARIPPPPPPLPGSAGIPPPP 731
Score = 21.0 bits (42), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 597 PXPXPPPPXXL 629
P P PPPP L
Sbjct: 638 PPPPPPPPPPL 648
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 28.3 bits (60), Expect(2) = 5.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +3
Query: 603 PXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSXSXXXPXXXPPXXXTXXAPXTP 761
P PP P + + P PG + P P S P PP + P P
Sbjct: 653 PPPPLPEGVGIPSPSSLPGGTAIP-PPPPLPGSARIPPPPPPLPGSAGIPPPP 704
Score = 21.0 bits (42), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 597 PXPXPPPPXXL 629
P P PPPP L
Sbjct: 611 PPPPPPPPPPL 621
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 28.3 bits (60), Expect(2) = 5.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +3
Query: 603 PXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSXSXXXPXXXPPXXXTXXAPXTP 761
P PP P + + P PG + P P S P PP + P P
Sbjct: 643 PPPPLPEGVGIPSPSSLPGSTAIP-PPPPLPGSARIPPPPPPLPGSAGIPPPP 694
Score = 21.0 bits (42), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 597 PXPXPPPPXXL 629
P P PPPP L
Sbjct: 601 PPPPPPPPPPL 611
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 28.3 bits (60), Expect(2) = 5.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +3
Query: 603 PXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSXSXXXPXXXPPXXXTXXAPXTP 761
P PP P + + P PG + P P S P PP + P P
Sbjct: 643 PPPPLPEGVGIPSPSSLPGGTAIP-PPPPLPGSARIPPPPPPLPGSAGIPPPP 694
Score = 21.0 bits (42), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 597 PXPXPPPPXXL 629
P P PPPP L
Sbjct: 601 PPPPPPPPPPL 611
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +3
Query: 519 PXRXQXXXPPXLWRGAVFVXXXRXXXPXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSX 698
P R PP L+ G F P P PPPP PP P P P
Sbjct: 267 PNRGDRPPPPVLFPGQPFGQPPLGPLP-PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPP 325
Query: 699 SXXXPXXXP 725
P P
Sbjct: 326 RPPGPLGPP 334
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +3
Query: 519 PXRXQXXXPPXLWRGAVFVXXXRXXXPXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSX 698
P R PP L+ G F P P PPPP PP P P P
Sbjct: 267 PNRGDRPPPPVLFPGQPFGQPPLGPLP-PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPP 325
Query: 699 SXXXPXXXP 725
P P
Sbjct: 326 RPPGPLGPP 334
>BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 535 GAXRPSCGXAPXSSXTXGXXXXXPFXPXPXHWXXXPPXXXPVXPXXXTPXPXPXPL 702
G P P S G P P P PP P+ P P P P PL
Sbjct: 529 GGPSPGAPGGPFPSSVPGSLLPPP-PPPPLPGGMLPPPPPPLPPGGPPPPPGPPPL 583
>BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 535 GAXRPSCGXAPXSSXTXGXXXXXPFXPXPXHWXXXPPXXXPVXPXXXTPXPXPXPL 702
G P P S G P P P PP P+ P P P P PL
Sbjct: 529 GGPSPGAPGGPFPSSVPGSLLPPP-PPPPLPGGMLPPPPPPLPPGGPPPPPGPPPL 583
>BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled
associated activator of morphogenesis 2 protein.
Length = 662
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 535 GAXRPSCGXAPXSSXTXGXXXXXPFXPXPXHWXXXPPXXXPVXPXXXTPXPXPXPL 702
G P P S G P P P PP P+ P P P P PL
Sbjct: 123 GGPSPGAPGGPFPSSVPGSLLPPP-PPPPLPGGMLPPPPPPLPPGGPPPPPGPPPL 177
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +3
Query: 519 PXRXQXXXPPXLWRGAVFVXXXRXXXPXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSX 698
P R PP L+ G F P P PPPP PP P P P
Sbjct: 194 PNRGDRPPPPVLFPGQPFGQPPLGPLP-PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPP 252
Query: 699 SXXXPXXXP 725
P P
Sbjct: 253 RPPGPLGPP 261
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +3
Query: 519 PXRXQXXXPPXLWRGAVFVXXXRXXXPXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSX 698
P R PP L+ G F P P PPPP PP P P P
Sbjct: 304 PNRGDRPPPPVLFPGQPFGQPPLGPLP-PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPP 362
Query: 699 SXXXPXXXP 725
P P
Sbjct: 363 RPPGPLGPP 371
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +3
Query: 519 PXRXQXXXPPXLWRGAVFVXXXRXXXPXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSX 698
P R PP L+ G F P P PPPP PP P P P
Sbjct: 267 PNRGDRPPPPVLFPGQPFGQPPLGPLP-PGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPP 325
Query: 699 SXXXPXXXP 725
P P
Sbjct: 326 RPPGPLGPP 334
>AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein.
Length = 1085
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 535 GAXRPSCGXAPXSSXTXGXXXXXPFXPXPXHWXXXPPXXXPVXPXXXTPXPXPXPL 702
G P P S G P P P PP P+ P P P P PL
Sbjct: 536 GGPSPGAPGGPFPSSVPGSLLPPP-PPPPLPGGMLPPPPPPLPPGGPPPPPGPPPL 590
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 597 PXPXPPPPXXLXLXPPXXXPGXSXXPDXKXP 689
P P PPPP PP PG S P P
Sbjct: 73 PPPPPPPPQQPPPPPPPPSPGASYPPPQPPP 103
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 30.3 bits (65), Expect = 8.0
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 597 PXPXPPPPXXLXLXPPXXXPGXSXXPDXKXPXSXSXXXPXXXPPXXXTXXAPXT 758
P P PPPP PP P P P S + P PP P T
Sbjct: 572 PPPPPPPP-----PPPPPPPPPPPPPPLPGPASETVPAPPLAPPLPSAPPLPGT 620
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,434,131
Number of Sequences: 237096
Number of extensions: 1198732
Number of successful extensions: 6220
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5429
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -