Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_P13
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro...    31   1.6  
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro...    31   1.6  
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB...    31   1.6  
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA...    31   1.6  
BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...    29   4.9  
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...    29   6.4  
AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD...    29   6.4  
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...    29   6.4  

>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
           protein protein.
          Length = 1091

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/54 (33%), Positives = 19/54 (35%)
 Frame = +1

Query: 463 PPPXXXGXXPPPPPXFXXXKKGXXXXXXXXGXXXPXXXGGXXXXXPPPPXFXXP 624
           PPP   G  PPPPP     + G            P   GG     PPPP    P
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPP-PPMPGRAGG-PPPPPPPPGMGGP 566


>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
           protein.
          Length = 1091

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/54 (33%), Positives = 19/54 (35%)
 Frame = +1

Query: 463 PPPXXXGXXPPPPPXFXXXKKGXXXXXXXXGXXXPXXXGGXXXXXPPPPXFXXP 624
           PPP   G  PPPPP     + G            P   GG     PPPP    P
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPP-PPMPGRAGG-PPPPPPPPGMGGP 566


>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
           isoform B protein.
          Length = 1091

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/54 (33%), Positives = 19/54 (35%)
 Frame = +1

Query: 463 PPPXXXGXXPPPPPXFXXXKKGXXXXXXXXGXXXPXXXGGXXXXXPPPPXFXXP 624
           PPP   G  PPPPP     + G            P   GG     PPPP    P
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPP-PPMPGRAGG-PPPPPPPPGMGGP 566


>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
           isoform A protein.
          Length = 1091

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/54 (33%), Positives = 19/54 (35%)
 Frame = +1

Query: 463 PPPXXXGXXPPPPPXFXXXKKGXXXXXXXXGXXXPXXXGGXXXXXPPPPXFXXP 624
           PPP   G  PPPPP     + G            P   GG     PPPP    P
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPP-PPMPGRAGG-PPPPPPPPGMGGP 566


>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
          protein.
          Length = 465

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 26 SSMSHRKFQXPVXGXIGIYPKXSS 97
          + MSHRKF  P  G +  YPK  S
Sbjct: 10 TDMSHRKFSAPRHGSMAFYPKKRS 33


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
          protein L3 protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 32 MSHRKFQXPVXGXIGIYPKXSS 97
          MSHRKF  P  G +  YPK  S
Sbjct: 1  MSHRKFSAPRHGSMAFYPKKRS 22


>AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD,
          isoform D protein.
          Length = 161

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 32 MSHRKFQXPVXGXIGIYPKXSS 97
          MSHRKF  P  G +  YPK  S
Sbjct: 1  MSHRKFSAPRHGSMAFYPKKRS 22


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
          isoform A protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 32 MSHRKFQXPVXGXIGIYPKXSS 97
          MSHRKF  P  G +  YPK  S
Sbjct: 1  MSHRKFSAPRHGSMAFYPKKRS 22


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,381,100
Number of Sequences: 53049
Number of extensions: 565712
Number of successful extensions: 3016
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)