Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_P10
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 32 0.49
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.5
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.5
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 2.0
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.4
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.4
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.4
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 29 6.0
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 29 6.0
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 29 6.0
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 28 7.9
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 541 SPAISATSTRSSNPRFHTPT---TPDLTSISINPLT-PYXKEFAPGLKPPLSSXAHQRIS 708
SPA +AT+ R P P +P + S++ T P FA +PP + +R+
Sbjct: 346 SPAANATAAREDAPEASIPAPAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNQRKRRVV 405
Query: 709 PPR 717
PP+
Sbjct: 406 PPK 408
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 521 PYASSHPPLRSRLHQPDHQIPDS 589
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 538 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSXAHQRISPP 714
P+P + T+T +NP TPTT TS N ++P+ + + A Q + P
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASP 547
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 359
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 532 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLT 639
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Frame = +1
Query: 532 KPPSPAISATSTRSSNPRF----HTPTTPDLTSISINPLTPYXKEFA---PGLKPPLSSX 690
K P P S+ + RS R H L + Y + A PG+ P
Sbjct: 602 KSPQPGTSSQTFRSQASRLPIAPHRAIAAGLNPADVGTRPAYRSQMAGQRPGMTPSAQQG 661
Query: 691 AHQRISPPR 717
+ Q ISPPR
Sbjct: 662 SPQLISPPR 670
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 529 IKPPSPAISATSTRSSNPRFHTPTTPD-LTSISINPLTP 642
+ SPAI +T+T +++P+ T TP+ +T++ + P
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 641 GVRGLMEMDVKSGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETANSNARG*RGG 480
G GL D G G G D V + + G+ G +GE N ++G RGG
Sbjct: 167 GPPGLAGQDGLDGAPGEPGVGGMDAVKIVSVDGKIG--RRGEAGNKGSKGSRGG 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,436,870
Number of Sequences: 27780
Number of extensions: 371948
Number of successful extensions: 1244
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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