Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_O03
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128867-1|BAC87651.1| 121|Homo sapiens protein ( Homo sapiens ... 35 0.46
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 34 0.81
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 34 0.81
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 34 0.81
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 34 0.81
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 34 0.81
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 34 0.81
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 34 0.81
Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine r... 33 1.4
U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine r... 33 1.4
BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor, n... 33 1.4
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 33 1.4
AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine... 33 1.4
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 33 1.9
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 33 1.9
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 33 1.9
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 33 1.9
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 33 1.9
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 33 1.9
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 33 1.9
AB002358-1|BAA21638.2| 1019|Homo sapiens KIAA0360 protein. 33 1.9
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 32 3.3
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 32 3.3
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 32 3.3
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 32 3.3
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 32 3.3
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 32 3.3
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 32 3.3
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 32 3.3
BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein. 32 3.3
BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein. 32 3.3
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 32 3.3
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 32 3.3
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 32 3.3
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 32 3.3
AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein. 32 3.3
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 32 3.3
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 32 3.3
Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine r... 31 4.3
U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine r... 31 4.3
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.7
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 31 5.7
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.7
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 31 5.7
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 31 5.7
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 31 5.7
AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic acet... 31 5.7
AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic acet... 31 5.7
AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine... 31 5.7
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 31 5.7
AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine... 31 5.7
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 31 7.5
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 31 7.5
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 31 7.5
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 7.5
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 31 7.5
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 31 7.5
X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for ... 30 10.0
BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1 p... 30 10.0
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 30 10.0
BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor, n... 30 10.0
AL359054-1|CAB94389.1| 259|Homo sapiens LDL induced endothelial... 30 10.0
AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SE... 30 10.0
AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein. 30 10.0
>AK128867-1|BAC87651.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ46838 fis, clone UTERU2035926. ).
Length = 121
Score = 34.7 bits (76), Expect = 0.46
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +2
Query: 701 SASGTXAGGXXAXXDPXPXXGXXYPLXXXXPPPKXRXTPPVXPPPPXAXXXARGHPAXRL 880
+ +G AGG A P P P PPP PP PPPP + R
Sbjct: 61 AGAGAGAGGVTAPRPPLPALHSAAP--GLPPPPPPPPPPPPLPPPPGVAGCGQNRSPNRA 118
Query: 881 GG 886
G
Sbjct: 119 AG 120
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.81
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V SE LW PD+VL NA G + V +NG+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.81
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V SE LW PD+VL NA G + V +NG+V W
Sbjct: 70 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 108
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.81
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V SE LW PD+VL NA G + V +NG+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.81
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V SE LW PD+VL NA G + V +NG+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.81
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V SE LW PD+VL NA G + V +NG+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.81
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V SE LW PD+VL NA G + V +NG+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.81
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V SE LW PD+VL NA G + V +NG+V W
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVW 143
>Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G T V ++++W+PD+VL N A GD+ + +A + NG ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITW 148
>U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G T V ++++W+PD+VL N A GD+ + +A + NG ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITW 148
>BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor,
nicotinic, alpha 6 protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G T V ++++W+PD+VL N A GD+ + +A + NG ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITW 148
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL N T V +NGSV W+
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNDGTYEVSVYTNLIVRSNGSVLWL 143
>AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine
receptor alpha 6 protein.
Length = 494
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G T V ++++W+PD+VL N A GD+ + +A + NG ++W
Sbjct: 104 GIETLRVPADKIWKPDIVLYNNA---VGDFQVEGKTKALLKYNGMITW 148
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+ SE +WRPD+VL NA A + +A + ++G V W
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+ SE +WRPD+VL NA A + +A + ++G V W
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+ SE +WRPD+VL NA A + +A + ++G V W
Sbjct: 88 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 126
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+ SE +WRPD+VL NA A + +A + ++G V W
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+ SE +WRPD+VL NA A + +A + ++G V W
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+ SE +WRPD+VL NA A + +A + ++G V W
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
+ SE +WRPD+VL NA A + +A + ++G V W
Sbjct: 113 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>AB002358-1|BAA21638.2| 1019|Homo sapiens KIAA0360 protein.
Length = 1019
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 701 SASGTXAGGXXAXXDPXPXXGXXYPLXXXXPPPKXRXTPPVXPPPPXAXXXARGH 865
+A+GT AGG P G PL PP+ PP PPPP GH
Sbjct: 140 AATGTAAGGGGGLILASPKLGAT-PL-----PPESTPAPPPPPPPPPPPGVGSGH 188
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 103 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 148
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 74 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 119
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +2
Query: 281 GEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWI 424
G G V ++++W+PD+VL N A GD+ + +A + G V+WI
Sbjct: 99 GYGGAEFMRVPAQKIWKPDIVLYNNA---VGDFQVTTKTKALLKYTGEVTWI 147
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 103 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 148
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein.
Length = 289
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +2
Query: 707 SGTXAGGXXAXXDPX--PXXGXXYPLXXXXPPPKXRXTPPVXPPPPXAXXXARGHPAXRL 880
SGT GG P G PPP PP PPPP G PA
Sbjct: 79 SGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPP-PPPPPCGGIACHGEPAKFY 137
Query: 881 G 883
G
Sbjct: 138 G 138
>BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein.
Length = 289
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +2
Query: 707 SGTXAGGXXAXXDPX--PXXGXXYPLXXXXPPPKXRXTPPVXPPPPXAXXXARGHPAXRL 880
SGT GG P G PPP PP PPPP G PA
Sbjct: 79 SGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPP-PPPPPCGGIACHGEPAKFY 137
Query: 881 G 883
G
Sbjct: 138 G 138
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 105 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 150
>AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein.
Length = 290
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +2
Query: 707 SGTXAGGXXAXXDPX--PXXGXXYPLXXXXPPPKXRXTPPVXPPPPXAXXXARGHPAXRL 880
SGT GG P G PPP PP PPPP G PA
Sbjct: 79 SGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPP-PPPPPCGGIACHGEPAKFY 137
Query: 881 G 883
G
Sbjct: 138 G 138
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 104 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 149
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G V ++++W+PD+VL NA D +A + G V+WI
Sbjct: 99 GAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWI 144
>Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 31.5 bits (68), Expect = 4.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
V SE +W PD+VL NA A + +A + + G+V W+
Sbjct: 135 VPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWV 174
>U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 31.5 bits (68), Expect = 4.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
V SE +W PD+VL NA A + +A + + G+V W+
Sbjct: 135 VPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWV 174
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL NA T V +NGSV W+
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL NA T V +NGSV W+
Sbjct: 52 GVNILRIPAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 97
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL NA T V +NGSV W+
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL NA T V +NGSV W+
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL NA T V +NGSV W+
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL NA T V +NGSV W+
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic
acetylcholine receptor subunit4 protein.
Length = 450
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 421
+ S +WRPD+VL N A A G + + ++G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic
acetylcholine alpha10 subunit protein.
Length = 450
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 421
+ S +WRPD+VL N A A G + + ++G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 421
+ S +WRPD+VL N A A G + + ++G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 424
G + + ++R+W PD+VL NA T V +NGSV W+
Sbjct: 99 GVNILRIPAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWL 144
>AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 421
+ S +WRPD+VL N A A G + + ++G+V W
Sbjct: 106 IPSSLVWRPDIVLYNKADAQPPGSASTNVVLRHDGAVRW 144
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
+ SE++WRPD+VL N A GD+A+ + + G ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
+ SE++WRPD+VL N A GD+A+ + + G ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
+ SE++WRPD+VL N A GD+A+ + + G ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +2
Query: 746 PXPXXGXXYPLXXXXPPPK--XRXTPPVXPPPPXAXXXARGHPA 871
P P G YP PPP R +PP PPP + PA
Sbjct: 88 PPPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPGPA 131
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
+ SE++WRPD+VL N A GD+A+ + + G ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
+ SE++WRPD+VL N A GD+A+ + + G ++W
Sbjct: 100 IPSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor beta-subunit. ).
Length = 501
Score = 30.3 bits (65), Expect = 10.0
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL--RARVSNNGSVSW 421
G + +++E +W PDVVLLN D AL VS++GSV W
Sbjct: 97 GIDSLRITAESVWLPDVVLLNNNDGNF-DVALDISVVVSSDGSVRW 141
>BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1
protein.
Length = 1542
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 773 PLXXXXPPPKXRXTPPVXPPPPXAXXXARG 862
PL PPP PP PPPP RG
Sbjct: 1467 PLPPPPPPPLPPPPPPPLPPPPPLPKTPRG 1496
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +2
Query: 746 PXPXXGXXYPLXXXXPPPKXRXTPPVXPPPPXAXXXARG 862
P P G PL PPP R PPV PP + RG
Sbjct: 347 PLPSPGRSGPLP---PPPSERPPPPVRDPPGRSGMTRRG 382
>BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor,
nicotinic, beta 1 (muscle) protein.
Length = 501
Score = 30.3 bits (65), Expect = 10.0
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL--RARVSNNGSVSW 421
G + +++E +W PDVVLLN D AL VS++GSV W
Sbjct: 97 GIDSLRITAESVWLPDVVLLNNNDGNF-DVALDISVVVSSDGSVRW 141
>AL359054-1|CAB94389.1| 259|Homo sapiens LDL induced endothelial
cell protein protein.
Length = 259
Score = 30.3 bits (65), Expect = 10.0
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +2
Query: 698 TSASGTXAGGXXAXXDPXPXXGXXYPLXXXXPPPKXRXTPPVXPPPPXAXXXARGHP 868
TSA G+ A G P P P P R P V PPP + G P
Sbjct: 12 TSALGSRASGRRLFPGTPPTPRTPAPPVPASPAPPARSCPEVSVPPPALARGSPGPP 68
>AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SEB)
protein.
Length = 1542
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 773 PLXXXXPPPKXRXTPPVXPPPPXAXXXARG 862
PL PPP PP PPPP RG
Sbjct: 1467 PLPPPPPPPLPPPPPPPLPPPPPLPKTPRG 1496
>AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.
Length = 1605
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 773 PLXXXXPPPKXRXTPPVXPPPPXAXXXARG 862
PL PPP PP PPPP RG
Sbjct: 1530 PLPPPPPPPLPPPPPPPLPPPPPLPKTPRG 1559
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,624,495
Number of Sequences: 237096
Number of extensions: 2281985
Number of successful extensions: 11006
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 6441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9622
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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