Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_O03
(899 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.005
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.011
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.014
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.014
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.033
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.033
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.033
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.044
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.058
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.058
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.058
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.076
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.076
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.18
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.18
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.18
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.18
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.18
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 1.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.6
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 8.8
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 8.8
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 8.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 8.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 8.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 8.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 8.8
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 8.8
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 79 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 243
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 244 MNWIDKRLSWNA 279
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.005
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAG 282
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.011
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.014
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 421
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.014
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
+ RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 23.8 bits (49), Expect = 2.2
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WN 276
WN
Sbjct: 118 WN 119
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 23.8 bits (49), Expect = 2.2
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WN 276
WN
Sbjct: 118 WN 119
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.033
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.044
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWN 276
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 29.1 bits (62), Expect = 0.058
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 424
+++W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.058
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.058
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 284 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 421
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.076
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 421
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.076
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWI 424
V R+WRPD +L N A + VS+ G V W+
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.18
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWN 276
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.18
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWN 276
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.18
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWN 276
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.18
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWN 276
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.18
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 424
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWN 276
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDI 439
ER+WRPD N + + R+S +G + + RL I
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTI 158
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.9
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 253 IDKRLSW 273
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 6.6
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 253 IDKRLSW 273
D RL++
Sbjct: 68 TDPRLAF 74
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 37 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 70
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 177 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 210
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 205 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 238
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 233 PEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPG 266
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 38 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 71
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 66 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 99
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 94 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 127
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 38 PEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPG 71
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 9 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 42
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 37 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 70
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 65 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 98
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 93 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 126
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 121 PEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPG 154
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 747 PXPXXGPSTPSXLXXPXPXPAXLRRSAXPPLXRG 848
P G + P + P P LRR A P G
Sbjct: 149 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 182
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,508
Number of Sequences: 438
Number of extensions: 4274
Number of successful extensions: 58
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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