Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_N18
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M76559-1|AAA51903.1| 1091|Homo sapiens calcium channel alpha-2b ...    33   1.8  
BC117470-1|AAI17471.1| 1091|Homo sapiens calcium channel, voltag...    33   1.8  
BC117468-1|AAI17469.1| 1091|Homo sapiens calcium channel, voltag...    33   1.8  
AF083854-1|AAF03259.1| 1110|Homo sapiens dihydropyridine recepto...    33   1.8  
AC006145-1|AAD20938.1|  745|Homo sapiens WUGSC:H_DJ0560O14.1 pro...    33   1.8  
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro...    32   3.1  

>M76559-1|AAA51903.1| 1091|Homo sapiens calcium channel alpha-2b
           subunit protein.
          Length = 1091

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 668 VRNVDLHDDLGL*SIRKYMKSASERYFDKGMRYDNRLIVAGXDYSRIXIM 817
           +RN  +  + G  + R  +KS  ERY DKG R      V G DYS   ++
Sbjct: 555 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSLALVL 604


>BC117470-1|AAI17471.1| 1091|Homo sapiens calcium channel,
           voltage-dependent, alpha 2/delta subunit 1 protein.
          Length = 1091

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 668 VRNVDLHDDLGL*SIRKYMKSASERYFDKGMRYDNRLIVAGXDYSRIXIM 817
           +RN  +  + G  + R  +KS  ERY DKG R      V G DYS   ++
Sbjct: 555 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSLALVL 604


>BC117468-1|AAI17469.1| 1091|Homo sapiens calcium channel,
           voltage-dependent, alpha 2/delta subunit 1 protein.
          Length = 1091

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 668 VRNVDLHDDLGL*SIRKYMKSASERYFDKGMRYDNRLIVAGXDYSRIXIM 817
           +RN  +  + G  + R  +KS  ERY DKG R      V G DYS   ++
Sbjct: 555 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSLALVL 604


>AF083854-1|AAF03259.1| 1110|Homo sapiens dihydropyridine receptor
           alpha 2 subunit protein.
          Length = 1110

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 668 VRNVDLHDDLGL*SIRKYMKSASERYFDKGMRYDNRLIVAGXDYSRIXIM 817
           +RN  +  + G  + R  +KS  ERY DKG R      V G DYS   ++
Sbjct: 574 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSLALVL 623


>AC006145-1|AAD20938.1|  745|Homo sapiens WUGSC:H_DJ0560O14.1
           protein.
          Length = 745

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 668 VRNVDLHDDLGL*SIRKYMKSASERYFDKGMRYDNRLIVAGXDYSRIXIM 817
           +RN  +  + G  + R  +KS  ERY DKG R      V G DYS   ++
Sbjct: 209 IRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSLALVL 258


>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain
           protein.
          Length = 1798

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 534 KCHLVPKGHFTPLTDHGVESTENKRGTVTD 445
           +C  V  G+F P  DH +   EN RG V D
Sbjct: 551 RCEQVQPGYFRPFLDHLIWEAENTRGQVLD 580


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,352,449
Number of Sequences: 237096
Number of extensions: 2800378
Number of successful extensions: 10438
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10438
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)