Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_N15
(891 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 69 8e-14
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 68 1e-13
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 67 2e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 66 5e-13
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 65 9e-13
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 64 1e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 64 2e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 63 3e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 61 2e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 61 2e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 60 2e-11
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 8e-10
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 52 7e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 51 1e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 49 5e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 5e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 1e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 39 5e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 37 3e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 32 0.006
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.011
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 68.5 bits (160), Expect = 8e-14
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Frame = +3
Query: 180 KIVVNLTL-HLRHANIRESESSVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 353
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 354 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTF 521
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 522 KFGSRMHNSDEMDFVI--DKRXYSM---FXSGTWD 611
KFGS N D++ + +K + + SGTWD
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWD 202
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 67.7 bits (158), Expect = 1e-13
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Frame = +3
Query: 84 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESSVR 248
I SA C + D LL+ Y+R P S +VV L L L ++ + +
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 249 IQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVS 422
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A +
Sbjct: 69 TNVWLEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILH 128
Query: 423 NNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMD 560
G V W + + + +P D QTC KFGS ++ ++D
Sbjct: 129 YTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 66.9 bits (156), Expect = 2e-13
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Frame = +3
Query: 54 FCYRFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHAN 221
F + +LL C ++ T+L + L YD + P S +I N+T+ L +
Sbjct: 27 FGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLME 81
Query: 222 IRESESSVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT--- 389
+ S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQ 141
Query: 390 AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G V ++GSVS + + + WP D C FGS +H+ +E++ +
Sbjct: 142 TGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFL 201
Query: 570 DKRXYSM 590
DK+ + M
Sbjct: 202 DKKGFHM 208
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 65.7 bits (153), Expect = 5e-13
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 64.9 bits (151), Expect = 9e-13
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 64.5 bits (150), Expect = 1e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 64.1 bits (149), Expect = 2e-12
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVVNLT--LHLRHANIRESESSVRIQAD---LQMNWIDKRLS 293
+ D LL+ Y+R P LT L L+ + + E ++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 458
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 459 ISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMD 560
+ + ++ +P D Q+C KFGS +N ++D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.7 bits (148), Expect = 2e-12
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Frame = +3
Query: 102 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLT--LHLRHANIRESESSVRIQAD---LQ 266
C + D LL+ Y++ P + LT + L+ + + + +I ++
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 267 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 440
+W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G V
Sbjct: 79 QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 138
Query: 441 WIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMD 560
W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 139 WKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 219 NIRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 392
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVI 569
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 63.3 bits (147), Expect = 3e-12
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 13/199 (6%)
Frame = +3
Query: 63 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 221
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 222 IRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-G 395
+ E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 396 DYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFVIDK 575
Y V NNG+ ++ + + + +P D Q C KFGS ++ ++D +
Sbjct: 123 TYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQD 182
Query: 576 R----XYSMFXSGTWDXDG 620
S +G WD G
Sbjct: 183 EAGGDISSFITNGEWDLLG 201
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 62.5 bits (145), Expect = 5e-12
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +3
Query: 129 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESSVRIQAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 467
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 468 PISMQLDXWPNDIQTCTFKFGSRMHNSDEMD 560
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.7 bits (143), Expect = 9e-12
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Frame = +3
Query: 129 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESSVRIQAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 458
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 459 ISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMD 560
+ S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 60.9 bits (141), Expect = 2e-11
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESSVRIQADLQMNW 275
N +++S ++D+LL YD PD V + + +R I E + + + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 276 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 446
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 447 KRLDISTPISMQLDXWPNDIQTCTFKFGS 533
RL I M L+ +P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 60.9 bits (141), Expect = 2e-11
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Frame = +3
Query: 72 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESE 236
++C +A + + D LL+ Y+R P ++ V + L L ++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 237 SSVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL-- 407
+ ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTI 121
Query: 408 --RARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMD 560
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 122 MTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 60.5 bits (140), Expect = 2e-11
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Frame = +3
Query: 102 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESSVRIQADLQ 266
C++ TS S + L YDRD P+ K ++ L ++H N+ E +V L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 267 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 437
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 438 SWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEM 557
+ + WP DI CT S H S+E+
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +3
Query: 183 IVVNLTLHLRHANIRESESSVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 359
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 360 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGS 533
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 534 RMHNSDEMD 560
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 52.0 bits (119), Expect = 7e-09
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Frame = +3
Query: 129 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESSVRIQADLQMNWIDKR 287
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 288 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 453 LDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFV 566
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 51.2 bits (117), Expect = 1e-08
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +3
Query: 117 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESSVRIQADLQMNWID 281
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 282 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 453 LDISTPISMQLDXWPNDIQTCTFKFGS 533
L I M+L +P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.2 bits (112), Expect = 5e-08
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Frame = +3
Query: 129 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESSVRIQADLQMNWIDKR 287
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 288 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 453 LDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFV 566
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.2 bits (107), Expect = 2e-07
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESSVRIQADLQMNW 275
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 276 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 428
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 429 GSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGS 533
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 5e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESSVRIQADLQMNW 275
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 276 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 428
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 429 GSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGS 533
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.5 bits (93), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 222 IRESESSVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 401
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 402 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGS 533
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Frame = +3
Query: 105 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESSVRIQADLQM 269
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 270 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 440
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 441 WIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFV 566
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.1 bits (87), Expect = 5e-05
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Frame = +3
Query: 105 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESSVRIQADLQM 269
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 270 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 440
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 441 WIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFV 566
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.1 bits (87), Expect = 5e-05
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Frame = +3
Query: 105 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESSVRIQADLQM 269
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 270 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 440
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 441 WIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFV 566
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 273 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 425
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 426 NGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGS 533
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 36.7 bits (81), Expect = 3e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDIQ 509
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 510 TCTFKFGSRMHNSDEMDFVID 572
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 4e-04
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +3
Query: 231 SESSVRIQAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 398
+E S+ AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 399 YALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFGSRMHNSDEMDFV 566
++ + ++ ++ ++ +L + +M+ + +P+D Q C+ S H + ++ F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 35.1 bits (77), Expect = 9e-04
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +3
Query: 183 IVVNLT-LHLRHANIRESESSVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 356
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 357 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTCTFKFG 530
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 531 SRMHNSDEMDFV 566
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 32.3 bits (70), Expect = 0.006
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +3
Query: 183 IVVNLTLHLRHAN-IRESESSVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 344
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 345 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPNDIQ 509
LW+PD LNA + AL + S+ N +V + R+ M+ +P DIQ
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 510 TCTFKFGSRMHNSDEM 557
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.011
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 345 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDXWPNDIQTC 515
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 516 TFKFGSRMHNSDEM 557
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 326 PSAAAPLPCVPTQS 285
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 125 GQ*CCVFAFCRTSYSTSEEKPVTE 54
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,389
Number of Sequences: 438
Number of extensions: 5650
Number of successful extensions: 92
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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