Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_N11
(889 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 4e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 55 1e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 2e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 54 2e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 4e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 3e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 46 3e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 43 4e-06
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 43 4e-06
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 43 4e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 6e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 1e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 36 5e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 34 0.002
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 34 0.002
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.019
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.032
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.30
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 4e-11
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 155
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V++NGS ++ + + + P D Q C K GS +++D V+
Sbjct: 156 QTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 4e-11
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 155
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V++NGS ++ + + + P D Q C K GS +++D V+
Sbjct: 156 QTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V++NGS ++ + + + P D Q C K GS +++D V+
Sbjct: 88 QTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V+++GS ++ + M + P D Q C K GS +++D V+
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.4 bits (135), Expect = 8e-11
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANXRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWR 368
K+ VN L ++ N E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 369 PDVVLLN-AXATTAGDYALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXG 545
PD+VL N A Y + NG V W+ + ++ + P D QTC K G
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFG 170
Query: 546 SMXXXSDEMDXVIXEXIYSMXXSXAW 623
S D++ + + S W
Sbjct: 171 SWTFNGDQVSLALYNNKNFVDLSDYW 196
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V+++GS ++ + M + P D Q C K GS +++D V+
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V+++GS ++ + + + P D Q C K GS +++D V+
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V+++GS ++ + + + P D Q C K GS +++D V+
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDY 416
E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 417 ALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMDXVI 584
V+++GS ++ + + + P D Q C K GS +++D V+
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDYALRARVSNNGS 449
++ +W D +L W+ E+G L + S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 450 VSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMD 575
V W + + ++ P D QTC K GS ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDYALRARVSNNGS 449
++ +W D +L W E+G L + S+ +WRPD+VL N A A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 450 VSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMD 575
V W + + ++ P D QTC K GS ++D
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.8 bits (126), Expect = 1e-09
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDYALRARVSNNGS 449
++ +W D +L W E+G L + S+ +WRPD+VL N A +A V +G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGL 140
Query: 450 VSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMD 575
V W + S+ ++ P D QTC K GS ++D
Sbjct: 141 VVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.0 bits (124), Expect = 2e-09
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
Frame = +3
Query: 162 QRTIGTPPPDSKIVVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTW 341
+R +G + LTL ++ + E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 342 L-MSSERLWRPDVVLLN-AXATTAGDYALRARVSNNGSVSWIKRLDIXTPISMQLDXXPN 515
L + RLW+PDV++ N A G Y V NNG+ ++ + + + P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 516 DXQTCTFKXGSMXXXSDEMDXVIXE----XIYSMXXSXAWDV 629
D Q C K GS ++D + + I S + WD+
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 54.0 bits (124), Expect = 2e-09
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCXTWL-MSSERLWRPDVVLLN-AXATTAGDYALRARVSNNGS 449
++ W D +L WN E+G L + SE +W PD+VL N A +A + G
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGD 145
Query: 450 VSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGSMXXXSDEMD 575
VSW + + ++ P D Q+C K GS ++D
Sbjct: 146 VSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.8 bits (116), Expect = 2e-08
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 5/131 (3%)
Frame = +3
Query: 198 IVVNLTLHLRHA---NXRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSERLW 365
+VV L L L N ++ T + L+ W D + W+ E+G T L + SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 366 RPDVVLLNAXATTAGDYAL-RARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKX 542
PD+VL N G + +A + G V W + + + P D QTC K
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 543 GSMXXXSDEMD 575
GS ++D
Sbjct: 164 GSWTYDGIQID 174
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.6 bits (113), Expect = 4e-08
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWG-CXTWLMSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGS 449
++ W D +L WN ++G T + SE +W PD+VL NA +A + + G
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGK 132
Query: 450 VSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGS 548
V W + + ++ P D QTC K GS
Sbjct: 133 VVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Frame = +3
Query: 198 IVVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLSWNAGEW-GCXTWLMSSERLWRPD 374
+V L+LH + E + + W D L WNA E+ G + R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 375 VVLLNAXATTAGDYALRARV--SNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGS 548
+L N + V S+ G V W+ + + ++ P D Q C K S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 3e-07
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 6/142 (4%)
Frame = +3
Query: 165 RTIGTPPPDSKIVVNLTLHLRH-ANXRESESTVRIQADLQMNWIDKRLSWN--AGEWGCX 335
R G D +V + L +R A + + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 336 TWLMSSERLWRPDVVLLNAXATTAGDYALR---ARVSNNGSVSWIKRLDIXTPISMQLDX 506
T L + R+W PD+ N + + R+ NGSV + R+ + M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 507 XPNDXQTCTFKXGSMXXXSDEM 572
P D Q C+ + S +D++
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDL 188
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +3
Query: 243 ESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWLMSSERLWRPDVVLLNAXAT---TAGD 413
E + T + + +W+D+RL++ G+ + R+W+PD N + T
Sbjct: 46 EVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITS 105
Query: 414 YALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGS 548
R+ +G V + RL I M L+ P D Q C + GS
Sbjct: 106 PNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.0 bits (99), Expect = 2e-06
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 6/142 (4%)
Frame = +3
Query: 165 RTIGTPPPDSKIVVNLTLHLRHANXRESEST-VRIQADLQMNWIDKRLSWN--AGEWGCX 335
R G D VV + + +R + + + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 336 TWLMSSERLWRPDVVLLNAXATTAGDYALR---ARVSNNGSVSWIKRLDIXTPISMQLDX 506
T L + R+W PD+ N + + R+ NGSV + R+ + M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 507 XPNDXQTCTFKXGSMXXXSDEM 572
P D Q C+ + S +D++
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDL 188
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 42.7 bits (96), Expect = 4e-06
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = +3
Query: 147 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANXRESESTVRIQADLQMNWIDKRLSW-NAG 320
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 321 EWGCXTWLMSSERLWRPDV--VLLNAXATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 494
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 495 QLDXXPNDXQTCTFKXGSM 551
+L+ P D C+F S+
Sbjct: 189 RLNIFPFDDPLCSFAIESI 207
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 42.7 bits (96), Expect = 4e-06
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = +3
Query: 147 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANXRESESTVRIQADLQMNWIDKRLSW-NAG 320
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 321 EWGCXTWLMSSERLWRPDV--VLLNAXATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 494
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 495 QLDXXPNDXQTCTFKXGSM 551
+L+ P D C+F S+
Sbjct: 189 RLNIFPFDDPLCSFAIESI 207
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 42.7 bits (96), Expect = 4e-06
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = +3
Query: 147 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANXRESESTVRIQADLQMNWIDKRLSW-NAG 320
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 321 EWGCXTWLMSSERLWRPDV--VLLNAXATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 494
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 495 QLDXXPNDXQTCTFKXGSM 551
+L+ P D C+F S+
Sbjct: 189 RLNIFPFDDPLCSFAIESI 207
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 42.3 bits (95), Expect = 6e-06
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +3
Query: 279 QMNWIDKRLSWNAGEWGCXTWLMSSERLWRPDVVLLNAXATTAGDYALR---ARVSNNGS 449
+ +W D RLS+ + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 450 VSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGS 548
+ + RL I M+L P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 42.3 bits (95), Expect = 6e-06
Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Frame = +3
Query: 180 PPPDSKIVVNLTLHL--RHANXRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MS 350
P +I N+T+ L + + S + + + + + W D LSW ++ ++ +
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 351 SERLWRPDVVLLNAXATT---AGDYALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDX 521
S+ +W PD+ + N+ T G V ++GSVS + + + P D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 522 QTCTFKXGSMXXXSDEMDXVIXEXIYSM 605
C GS +E++ + + + M
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 39.1 bits (87), Expect = 5e-05
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 180 PPPDSKIVVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-MSSE 356
P + ++ L ++H N E TV L++ W L+W + E+ + + S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 357 RLWRPDVVL--LNAXATTAGDYALRARVSNNGSVSWIKRLDIXTPI-SMQLDXXPNDXQT 527
+W PD+V+ + + ++ V N+G++ + TP+ P D
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVCEYDHTWWPYDILN 172
Query: 528 CTFKXGSMXXXSDEM 572
CT S S+E+
Sbjct: 173 CTIHIASWSHGSNEI 187
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.9 bits (84), Expect = 1e-04
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +3
Query: 276 LQMNWIDKRLSWNAGEWGCXTWLMSSERLWRPDVVLLNAXATTAGDYALR---ARVSNNG 446
L W D+RL+++ E +E++W PD N + D R R+S +G
Sbjct: 88 LNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDG 147
Query: 447 SVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXGS 548
SV++ R M L P D Q CT + S
Sbjct: 148 SVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 35.9 bits (79), Expect = 5e-04
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Frame = +3
Query: 198 IVVNLT-LHLRHANXRESESTVRIQADLQMNWIDKRLSW-NAGEWGCXTWLMSSERLWRP 371
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 372 DV--VLLNAXATTAGDYALRARVSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTCTFKXG 545
D ++ R+ NG+V+++ R + +L+ P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 546 SM 551
S+
Sbjct: 257 SI 258
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.3 bits (75), Expect = 0.002
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCXTWLMSSE---RLWRPDVVLLNAX------ATTAGDYALRARVSN 440
W D RL++ G T + SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 441 NGSVSWIKRLDIXTPISMQLDXXPNDXQTC 530
+GS++ RL I M L P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.3 bits (75), Expect = 0.002
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCXTWLMSSE---RLWRPDVVLLNAX------ATTAGDYALRARVSN 440
W D RL++ G T + SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 441 NGSVSWIKRLDIXTPISMQLDXXPNDXQTC 530
+GS++ RL I M L P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.3 bits (75), Expect = 0.002
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCXTWLMSSE---RLWRPDVVLLNAX------ATTAGDYALRARVSN 440
W D RL++ G T + SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 441 NGSVSWIKRLDIXTPISMQLDXXPNDXQTC 530
+GS++ RL I M L P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.019
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 354 ERLWRPDVVLLNAXATTAGDYALRAR---VSNNGSVSWIKRLDIXTPISMQLDXXPNDXQ 524
+ +WRPD NA + T + + + ++ ++ +L + +M P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 525 TCTFKXGSMXXXSDEM 572
C + S+ +DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.9 bits (64), Expect = 0.032
Identities = 14/74 (18%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 360 LWRPDVVLLNAXATTAGDYALRAR---VSNNGSVSWIKRLDIXTPISMQLDXXPNDXQTC 530
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ + P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 531 TFKXGSMXXXSDEM 572
+ S+ + ++
Sbjct: 147 SMMIESLSHTTQDL 160
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.30
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +3
Query: 354 ERLWRPDVVLLNAXATTAGDYALRARVSN-----NGSVSWIKRLDIXTPISMQLDXXPND 518
+ LW+PD LNA + AL + S+ N +V + R+ M+ P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 519 XQTC 530
Q C
Sbjct: 127 IQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 341 PSAAAPLPCVPTQS 300
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,623
Number of Sequences: 438
Number of extensions: 3646
Number of successful extensions: 79
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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