Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_M20
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   1.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   4.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   4.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.9  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 69  GHELTADYWEL 101
           GH+++ADYW L
Sbjct: 541 GHDISADYWSL 551


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 414 GDVYCIAQSYRAEQS 458
           G+ +CI QS+ AE S
Sbjct: 123 GEAFCIIQSFAAETS 137


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 148 SSLRMASAPPGGASPINSQ*SAVSS*PPGAFFPSGTAS 35
           S++ M+S  P   SP++ +    S   PG F PSG  S
Sbjct: 35  SNMSMSSVGP--QSPLDMKPDTASLINPGNFSPSGPNS 70


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 148 SSLRMASAPPGGASPINSQ*SAVSS*PPGAFFPSGTAS 35
           S++ M+S  P   SP++ +    S   PG F PSG  S
Sbjct: 35  SNMSMSSVGP--QSPLDMKPDTASLINPGNFSPSGPNS 70


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 283 SRHRPWFKRSAKAAVPF 333
           S   PWFK+S +   P+
Sbjct: 126 SHEHPWFKKSVQRIKPY 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,559
Number of Sequences: 438
Number of extensions: 4900
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)