Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_M14
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029...    32   0.55 
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321...    30   2.2  
10_07_0095 - 12824101-12824463                                         29   3.8  
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305...    29   3.8  
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892...    29   3.8  
07_03_1747 + 29188568-29188715,29188793-29189541                       29   6.7  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   8.9  
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707...    28   8.9  
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198...    28   8.9  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    28   8.9  

>05_03_0366 -
           13102147-13102281,13102560-13102739,13102791-13102992,
           13104385-13104575
          Length = 235

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -1

Query: 312 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 148
           H P AAA  P VP++    P  L +     GG GL   S S +  G  + D G+GG
Sbjct: 7   HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61


>11_06_0411 -
           23230580-23230795,23231407-23231862,23232142-23232195,
           23232251-23232367
          Length = 280

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 210 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 326
           V+ H  +  R S EL+RQ  ELER+G  L+   G L  +
Sbjct: 89  VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127


>10_07_0095 - 12824101-12824463
          Length = 120

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -3

Query: 436 PGALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQAS 329
           PGA   RR    +HG+G R PRR L     V R  S
Sbjct: 5   PGAQHGRRRPQSLHGQGRRRPRRGLAGESTVLRARS 40


>08_02_1291 +
           25930056-25930067,25930289-25930334,25930434-25930546,
           25930645-25930930,25931357-25931421,25931642-25931693,
           25931774-25931883,25932611-25932641,25932853-25933004,
           25934622-25934840
          Length = 361

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 225 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 136
           +GG  L    ++Q  G   Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129


>01_06_0565 +
           30287253-30287502,30287522-30289010,30289133-30289277,
           30289679-30289729
          Length = 644

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
 Frame = -1

Query: 885 GXXPXXPXXGTXXXRPXGXGGXXXRPXVXVXSPRXQXTXGXPXG---XGPXPXDXXAXP 718
           G  P  P  GT    P G GG    P     SP    +   P G     P P D    P
Sbjct: 102 GYNPPSPSIGTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPGGGCSSSPTPCDAPPSP 160


>07_03_1747 + 29188568-29188715,29188793-29189541
          Length = 298

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +2

Query: 365 PPPGTTLSAPVYLITAPSPG*SAWTLXLHFLCS*TIGPTTCRLARSSSVLG 517
           PPP TT++  V L TA +   S   +   F+C+     TTC  + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 666 NXSXXXSPXKXPRPPPXAGXXXGPXAGAPXLXXP 767
           N     S    P PPP A    GP A AP L  P
Sbjct: 704 NGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPP 737


>07_03_0809 -
           21669632-21669637,21669871-21670131,21670573-21670752,
           21671458-21672819
          Length = 602

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 97  SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 252
           +L   +D L+  YD+  PPDS+ V        HA      + +R+L  + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209


>02_01_0296 +
           1978565-1981197,1981216-1981639,1982280-1982771,
           1982950-1983087
          Length = 1228

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 394 GRGERSPRRWLQPRLAVPRQASTSVPRTP 308
           GRG RS  R L+P LA+   A + +P  P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -1

Query: 339 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 172
           ++PP     H   + AP P +P+ S   P++  +   PH        S +QM  Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,617,166
Number of Sequences: 37544
Number of extensions: 493963
Number of successful extensions: 1462
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)