Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_M13
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.4
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 31 5.5
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 31 5.5
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 31 5.5
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 31 5.5
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.5
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Frame = +1
Query: 385 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 564
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 139 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 193
Query: 565 PIIKSPIPYTNHPRLNIHFHQIP*TPY*KEFAPGLKPPLSSXAP-SAYLTPSSL 723
P+ S + T P P TP E +P PP S P SA+LTPSSL
Sbjct: 194 PLQLS-VEDTTSPNTK----PCPPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 242
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 31.1 bits (67), Expect = 5.5
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Frame = +1
Query: 385 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 564
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332
Query: 565 PIIKSPIPYTNHPRLNIHFHQIP*TPY*KEFAPGLKPPLSSXAP-SAYLTPSSL 723
P+ S + T P P TP E +P PP S P SA+LTPSSL
Sbjct: 333 PLQLS-VEDTTSPNTK----PCPPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 31.1 bits (67), Expect = 5.5
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Frame = +1
Query: 385 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 564
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332
Query: 565 PIIKSPIPYTNHPRLNIHFHQIP*TPY*KEFAPGLKPPLSSXAP-SAYLTPSSL 723
P+ S + T P P TP E +P PP S P SA+LTPSSL
Sbjct: 333 PLQLS-VEDTTSPNTK----PCPPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 31.1 bits (67), Expect = 5.5
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Frame = +1
Query: 385 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 564
V P A S +P T T+ + VE A P S + I + PC +
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332
Query: 565 PIIKSPIPYTNHPRLNIHFHQIP*TPY*KEFAPGLKPPLSSXAP-SAYLTPSSL 723
P+ S + T P P TP E +P PP S P SA+LTPSSL
Sbjct: 333 PLQLS-VEDTTSPNTK----PCPPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,911,739
Number of Sequences: 237096
Number of extensions: 2563457
Number of successful extensions: 9641
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9631
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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