Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_M05
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 32 0.092
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.21
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.49
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 29 0.65
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 29 0.86
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 29 1.1
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 28 1.5
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 28 1.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 2.0
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 28 2.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr 1... 27 2.6
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 3.5
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 3.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.5
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 27 4.6
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 27 4.6
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 6.0
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 26 8.0
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 8.0
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 26 8.0
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 32.3 bits (70), Expect = 0.092
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 545 AISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSSLG 724
A+ AT T S+NP T I N + K F+ PP++++ P +L P+S
Sbjct: 683 ALPATVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA--PPIATKKPPTFLKPNSPE 740
Query: 725 XAKGVSP 745
AK V P
Sbjct: 741 YAKTVIP 747
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.21
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 536 PSPAISATSTRSSN---PRFHTPTTPDLTSIS-INPLTPYXKEFAPGLKP 673
P P+IS T+T SS H PTTPD ++ + L P +P KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.49
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 694
PP PA ++++ SS+P T +T TS SI P P + PP SS P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
PP PA ++++ SS+P + +T TS SI P P + PP S+ + S P
Sbjct: 316 PPPPASTSSTGTSSSP-LPSTSTSCTTSTSIPPTGNSTTPVTPTV-PPTSTSSTSTPPPP 373
Query: 713 SSLGXAKGVSPP 748
+S S P
Sbjct: 374 ASTSSTGTSSSP 385
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Frame = +1
Query: 277 TGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVT 456
T T S +T + +S+ Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 457 VEGVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 597
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Score = 27.9 bits (59), Expect = 2.0
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Frame = +1
Query: 289 TKSNSVTVQSLPNVSSIIKG--YRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 462
T +N T S+P S+ + +V + S P P+T C T+ +
Sbjct: 423 TTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYT 482
Query: 463 GVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 597
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 483 STPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 531
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 29.5 bits (63), Expect = 0.65
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +2
Query: 539 SPAISATSTRSS-NPRFHTPTTPDLTSISINPLTP-----YXKEFAPGLKPPLSSEAPSA 700
SP +SA S +P P+TP + SI+P TP Y + A L PLS + +A
Sbjct: 284 SPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTA 343
Query: 701 YL 706
YL
Sbjct: 344 YL 345
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 29.1 bits (62), Expect = 0.86
Identities = 20/77 (25%), Positives = 29/77 (37%)
Frame = +2
Query: 530 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
+PPS A+ + + P P P + + NP TP+ P + A + L
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF-SPINPYYAKSWNHTASAPLLP 303
Query: 710 PSSLGXAKGVSPPYFQV 760
P G G PY V
Sbjct: 304 P---GLKNGSDYPYLSV 317
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 277 TGTETKSNSVTV-QSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTA 447
TG +T+ QSL N+S S I R N A FPS S +P VDL
Sbjct: 308 TGVSLSRPRLTLDQSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQM 366
Query: 448 DVTVEGVNVLATPSSS 495
DV+ E L+TP S
Sbjct: 367 DVSDEEQRFLSTPLGS 382
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 WDDLFMEEIVPLXVSAASAIPSLVNAFSSSKPPQTD 111
W D+F + +P+ ++A IPSL A SK P T+
Sbjct: 239 WFDIF--DFIPMIFTSALLIPSLYPALERSKLPFTE 272
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 28.3 bits (60), Expect = 1.5
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTP-YXKEFAPGLKPPLSSEAPSAYLTP 712
P ++S+ FHTPT P T +S +P + + PLS +A S LT
Sbjct: 123 PPNSLSSQPKHQEFHLFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--LTS 180
Query: 713 SSLGXAKGVSPPYFQVNDESQA 778
S L + SPP V +S +
Sbjct: 181 SPLKDFQS-SPPLSTVLQKSHS 201
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTP----TTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 694
+ +P S+T+ +S P + +TP +S ++N TP P++S
Sbjct: 1578 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1637
Query: 695 SAYLTPSSLGXAKGVSPP 748
TP + A SPP
Sbjct: 1638 LNSSTPITSSTALNTSPP 1655
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +2
Query: 557 TSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSSLGXAKG 736
TST ++ +TP +S +N TP A PP++S TP +
Sbjct: 1616 TSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVN 1675
Query: 737 VSPP 748
S P
Sbjct: 1676 TSTP 1679
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 539 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSS 718
S + TST ++ +TP +S +N TP A P++S + TP +
Sbjct: 1718 SSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1777
Query: 719 LGXAKGVSPP 748
A S P
Sbjct: 1778 SSTALNTSTP 1787
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 530 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
+PPSP I R+S F +PT S+ + + G+ P SS A A+L+
Sbjct: 494 RPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHSTSSSSGISPSHSS-ASLAHLS 552
Query: 710 PSS 718
+S
Sbjct: 553 QAS 555
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.6
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 542 PAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSSL 721
P I S+ SS P P P + PL P + P PP APS P L
Sbjct: 325 PPIGNGSSNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPP---PPPPRSAPSTGRQPPPL 379
Query: 722 GXAKGVSPP 748
++ VS P
Sbjct: 380 SSSRAVSNP 388
>SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 524 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILR 405
I A P +R AS+ TP+ T+A+ QQ GI+R
Sbjct: 9 IPAEPSAAVRSGNAAASS-TPNMKTAAIQQQIDDTVGIMR 47
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 259 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD-AYLVN 372
R+Y L T ++S + PN S + +GY + A+L+N
Sbjct: 2840 RVYLPLVPTIQANSSADSSNPPNTSFLFRGYHETAWLIN 2878
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 739 FAPLFSSE**ITSFXPYKSSFPHNPVPP 822
F LF S+ T P SS PHN PP
Sbjct: 736 FGSLFGSKKKQTEIPPVSSSPPHNDAPP 763
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 539 SPAISATSTRSSNPRFHTPTTPDLTSIS 622
S IS +ST N FH PT TS S
Sbjct: 801 SRTISTSSTNEYNTSFHAPTVSSTTSSS 828
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG--LKPPLSSEAPSA 700
I+ S + TS S++ ++ +TP+ S + LTP + L+ PL +PSA
Sbjct: 294 IRSHSTNTTITSVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSA 353
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 340 IKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
+K RD YL NLEA FPS+ +KI +T+D
Sbjct: 378 LKTRRDQYLTNLEA--FPSSLFMKI-LTLD 404
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 545 AISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSS 718
A+ ++ S F PTT S+SI+P K A +P + ++ S TP++
Sbjct: 69 AVETNASASHETSFALPTTSPAASLSISP----TKSAAVSSEPNVEADVKSLSSTPAA 122
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 509 PIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTAS 375
P ++E + TL +T+T V + + +L++ AEGK TAS
Sbjct: 507 PEEIKERIAIPKTLI-ATITLPDVSPNAKIELVLQIDAEGKLTAS 550
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 100 GVWKKRKH*PRREWPKRQKRXKAQF 26
G WKK + + EW K ++ KA++
Sbjct: 119 GEWKKAREEDKAEWKKAREEDKAEW 143
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 620 SINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSS 718
S+NP TP +P + PP+S+ +P P S
Sbjct: 271 SLNPSTPSPFGGSPVMHPPVSNLSPRTPAVPMS 303
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,347,139
Number of Sequences: 5004
Number of extensions: 67851
Number of successful extensions: 363
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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