Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_M05
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 34 0.58
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 34 0.58
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 34 0.58
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 34 0.58
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 34 0.58
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 34 0.58
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 34 0.58
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 33 1.3
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 33 1.3
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 33 1.3
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 33 1.3
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 33 1.3
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 33 1.3
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 33 1.3
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 33 1.3
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 33 1.3
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 33 1.3
BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein. 33 1.8
AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein. 33 1.8
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.4
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 5.4
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 5.4
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 5.4
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 31 5.4
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 31 5.4
BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein. 30 9.5
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 30 9.5
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 30 9.5
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 30 9.5
AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated pr... 30 9.5
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 30 9.5
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 30 9.5
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 30 9.5
AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein. 30 9.5
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 30 9.5
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 30 9.5
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 30 9.5
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 30 9.5
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 30 9.5
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPYXKEFAPGLKPPLSSE 688
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG-----LKPPLSSEAPSA 700
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 324
Query: 701 YLTP 712
TP
Sbjct: 325 TATP 328
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPYXKEFAPGLKPPLSSE 688
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 178 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 34.3 bits (75), Expect = 0.58
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP+ + P
Sbjct: 399 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPIPASTPH 457
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 458 GQMTPMQGGRSSTISVHDPFSDVSDSS 484
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG-----LKPPLSSEAPSA 700
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAR 324
Query: 701 YLTP 712
TP
Sbjct: 325 TATP 328
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPYXKEFAPGLKPPLSSE 688
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG-----LKPPLSSEAPSA 700
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 270 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 328
Query: 701 YLTP 712
TP
Sbjct: 329 TATP 332
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSS 734
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSS 483
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSS 734
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSS 734
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 707
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 708 GQMTPMQGGRSSTISVHDPFSDVSDSS 734
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSS 483
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 1078 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 1136
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 1137 GQMTPMQGGRSSTISVHDPFSDVSDSS 1163
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 653 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 711
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 712 GQMTPMQGGRSSTISVHDPFSDVSDSS 738
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 870 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 928
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 929 GQMTPMQGGRSSTISVHDPFSDVSDSS 955
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEF-----APG-LKPPLSSEAPS 697
P P + +T P+ P+ + S+ P TP PG LKPP + P
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPTPASTPH 456
Query: 698 AYLTPSSLGXAKGVS--PPYFQVNDES 772
+TP G + +S P+ V+D S
Sbjct: 457 GQMTPMQGGRSSTISVHDPFSDVSDSS 483
>BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPT-----TPDLTSISINPLTPYXKEFAPGLKP----PLSSE 688
PS A ++TS R+S P TPT TP T I LTP G P P ++
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 689 APSAYLTPSSLGXAKGVSPP 748
P+ TP+ + V PP
Sbjct: 69 IPTLVPTPALARIPRLVPPP 88
>AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPT-----TPDLTSISINPLTPYXKEFAPGLKP----PLSSE 688
PS A ++TS R+S P TPT TP T I LTP G P P ++
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 689 APSAYLTPSSLGXAKGVSPP 748
P+ TP+ + V PP
Sbjct: 69 IPTLVPTPALARIPRLVPPP 88
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 898 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 957
Query: 701 YLTPSSLGXAKGVSPP 748
TPS PP
Sbjct: 958 TTTPSPPTITTTTPPP 973
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 1027 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1086
Query: 713 SSLGXAKGV-SPP 748
++ + SPP
Sbjct: 1087 TTTPSSTTTPSPP 1099
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 977 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1036
Query: 701 YLTPSSLGXAKGVSPP 748
TPS PP
Sbjct: 1037 TTTPSPPITTTTTPPP 1052
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLK--PPLSSEAPSAYL 706
PP+ S+ T + +P T TTP T+ +P+T + PP + PS
Sbjct: 1051 PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTT 1110
Query: 707 TPSSLGXAKGVSPP 748
TPS PP
Sbjct: 1111 TPSPPTTTMTTLPP 1124
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 181 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 240
Query: 701 YLTPSSLGXAKGVSPP 748
TPS PP
Sbjct: 241 TTTPSPPTITTTTPPP 256
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 310 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 369
Query: 713 SSLGXAKGV-SPP 748
++ + SPP
Sbjct: 370 TTTPSSTTTPSPP 382
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 260 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 319
Query: 701 YLTPSSLGXAKGVSPP 748
TPS PP
Sbjct: 320 TTTPSPPITTTTTPPP 335
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLK--PPLSSEAPSAYL 706
PP+ S+ T + +P T TTP T+ +P+T + PP + PS
Sbjct: 334 PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTT 393
Query: 707 TPSSLGXAKGVSPP 748
TPS PP
Sbjct: 394 TPSPPTTTMTTLPP 407
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 701 YLTPSSLGXAKGVSPP 748
TPS PP
Sbjct: 1583 TTTPSPPTITTTTPPP 1598
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 1652 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1711
Query: 713 SSLGXAKGV-SPP 748
++ + SPP
Sbjct: 1712 TTTPSSTTTPSPP 1724
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 700
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1661
Query: 701 YLTPSSLGXAKGVSPP 748
TPS PP
Sbjct: 1662 TTTPSPPITTTTTPPP 1677
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLK--PPLSSEAPSAYL 706
PP+ S+ T + +P T TTP T+ +P+T + PP + PS
Sbjct: 1676 PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTT 1735
Query: 707 TPSSLGXAKGVSPP 748
TPS PP
Sbjct: 1736 TPSPPTTTMTTLPP 1749
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 575 NPRFHTPTTPDLTSISINPLTPYXKEFAPGLKP-PLSSEAPSAYLTPSSLGXAKGVSPP 748
NP P T + ++ P P L+P P AP L P G KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 575 NPRFHTPTTPDLTSISINPLTPYXKEFAPGLKP-PLSSEAPSAYLTPSSLGXAKGVSPP 748
NP P T + ++ P P L+P P AP L P G KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein.
Length = 263
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGXAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 153 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLASGAAPGYAPPPF 208
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 694
PP P S+ S P + + S+ P P+ + PG +PP +++P
Sbjct: 46 PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGXAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 1009 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLASGAAPGYAPPPF 1064
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 694
PP P S+ S P + + S+ P P+ + PG +PP +++P
Sbjct: 46 PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 358
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGXAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 248 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLASGAAPGYAPPPF 303
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGXAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 1009 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLASGAAPGYAPPPF 1064
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGXAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 487 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLASGAAPGYAPPPF 542
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 211 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 242
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 694
PP P S+ S P + + S+ P P+ + PG +PP +++P
Sbjct: 46 PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein.
Length = 583
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGXAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 443 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLAQGAAPGYAPPPF 498
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 54 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGXAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 647 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLASGAAPGYAPPPF 702
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,345,544
Number of Sequences: 237096
Number of extensions: 2720789
Number of successful extensions: 7090
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 6444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7058
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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