Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_M03
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.78
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 1.8
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 29 3.1
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 29 3.1
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 29 3.1
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 29 3.1
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.1
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 29 3.1
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.1
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 29 4.2
Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 29 5.5
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 5.5
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.78
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPGLTSISINPLTPYXXEFAPGFKASVVIRGSSAYLTPS 715
P+P + T+T +NP TPTT G TS N ++P+ S +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548
Query: 716 SLGMAKXGSPP 748
+ S P
Sbjct: 549 TTPTHTTASQP 559
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPDS 587
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPGLTSISINPLTPYXXEFAPGFKASVVIRGSSAYLTPS 715
P+PA S++S+ SS P F + +S SI P+ F ++ V GSS+ TPS
Sbjct: 343 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF-------FASTEVPAGSSSISTPS 395
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPGLTSISINPLTPYXXEFAPGFKASVVIRGSSAYLTPS 715
P+PA S++S+ SS P F + +S SI P+ F ++ V GSS+ TPS
Sbjct: 447 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF-------FASTEVPAGSSSISTPS 499
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPGLTSISINPLTPYXXEFAPGFKASVVIRGSSAYLTPS 715
P+PA S++S+ SS P F + +S SI P+ F ++ V GSS+ TPS
Sbjct: 498 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF-------FASTEVPAGSSSISTPS 550
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPGLTSISINPLTPYXXEFAPGFKASVVIRGSSAYLTPS 715
P+PA S++S+ SS P F + +S SI P+ F ++ V GSS+ TPS
Sbjct: 498 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF-------FASTEVPAGSSSISTPS 550
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +2
Query: 611 TSISINPLTPYXXEFAPGFKASVVIRGSSAYLTPSSLGMAKXGSPPYFK*MMXPXLPALI 790
+S S P + G A+ SS+ TPSS K SPP+ + P P
Sbjct: 28 SSSSAAPASAPAPRAGAGAGATSSSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPR- 86
Query: 791 NRXSXHNPVPPSN 829
+ S H P PP++
Sbjct: 87 DVTSAHAPPPPAS 99
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -2
Query: 639 GVRGLMEMDVKPGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETANSNARG*RGG 478
G+ G +D PG GV G D V + + G+ G +GE N ++G RGG
Sbjct: 170 GLAGQDGLDGAPGEPGV---GGMDAVKIVSVDGKIG--RRGEAGNKGSKGSRGG 218
>Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical
protein ZC434.3 protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSN-PRFHTPTTPGLTSISINPLTPYXXEFAPG 664
PP+PA N P F+ P PG + S++PL P+ +++ G
Sbjct: 34 PPNPAPFKPRQEDYNLPPFYQPN-PGRDASSLSPLFPFHSQYSNG 77
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 530 KPPSPAISATSTRSSNPRFHTPTTPGLTSISINPLT 637
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPGLTSISINPLTP 640
P+P + T+T +NP TPTT G +I +P P
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG--TIGTSPTAP 522
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,143,288
Number of Sequences: 27780
Number of extensions: 379199
Number of successful extensions: 1135
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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