Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_L24
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98256-2|CAI20115.1| 211|Homo sapiens TIMP metallopeptidase inh... 32 3.1
Z30183-1|CAA82918.1| 210|Homo sapiens mig-5 protein. 32 3.1
X76227-1|CAA53813.1| 211|Homo sapiens tissue inhibitor of metal... 32 3.1
U67195-1|AAB07547.1| 211|Homo sapiens tissue inhibitor of metal... 32 3.1
U38955-1|AAB17602.1| 170|Homo sapiens tissue inhibitor of metal... 32 3.1
U33114-1|AAC50393.1| 211|Homo sapiens tissue inhibitor of metal... 32 3.1
U14394-1|AAB60373.1| 211|Homo sapiens tissue inhibitor of metal... 32 3.1
U02571-1|AAA17672.1| 211|Homo sapiens tissue inhibitor of metal... 32 3.1
S78453-1|AAB34532.1| 211|Homo sapiens TIMP-3 protein. 32 3.1
L15078-1|AAA21815.1| 197|Homo sapiens metalloproteinase-3 tissu... 32 3.1
CR456593-1|CAG30479.1| 211|Homo sapiens TIMP3 protein. 32 3.1
BT006848-1|AAP35494.1| 211|Homo sapiens tissue inhibitor of met... 32 3.1
BC014277-1|AAH14277.1| 211|Homo sapiens TIMP metallopeptidase i... 32 3.1
AL023282-2|CAI17996.1| 211|Homo sapiens TIMP metallopeptidase i... 32 3.1
AF103198-1|AAD30758.1| 129|Homo sapiens immunoglobulin heavy ch... 32 3.1
AY971957-1|AAY46815.1| 1389|Homo sapiens abnormal spindle-like m... 31 5.4
AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like m... 31 5.4
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ... 31 5.4
AK001379-1|BAA91660.1| 285|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein. 31 5.4
>Z98256-2|CAI20115.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>Z30183-1|CAA82918.1| 210|Homo sapiens mig-5 protein.
Length = 210
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 174 PGYQSKHYACIRQKGGYCSWYRGW 197
>X76227-1|CAA53813.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>U67195-1|AAB07547.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase-3 protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>U38955-1|AAB17602.1| 170|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 170
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 134 PGYQSKHYACIRQKGGYCSWYRGW 157
>U33114-1|AAC50393.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>U14394-1|AAB60373.1| 211|Homo sapiens tissue inhibitor of
metalloproteinases-3 protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>U02571-1|AAA17672.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase-3 precursor protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>S78453-1|AAB34532.1| 211|Homo sapiens TIMP-3 protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>L15078-1|AAA21815.1| 197|Homo sapiens metalloproteinase-3 tissue
inhibitor protein.
Length = 197
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 161 PGYQSKHYACIRQKGGYCSWYRGW 184
>CR456593-1|CAG30479.1| 211|Homo sapiens TIMP3 protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>BT006848-1|AAP35494.1| 211|Homo sapiens tissue inhibitor of
metalloproteinase 3 (Sorsby fundus dystrophy,
pseudoinflamm protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>BC014277-1|AAH14277.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>AL023282-2|CAI17996.1| 211|Homo sapiens TIMP metallopeptidase
inhibitor 3 (Sorsby fundus dystrophy,
pseudoinflammatory) protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 656 PGCVSEHYACIRHDGAYASFVESY 585
PG S+HYACIR G Y S+ +
Sbjct: 175 PGYQSKHYACIRQKGGYCSWYRGW 198
>AF103198-1|AAD30758.1| 129|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 129
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 174 ALFADDTAIYYSCRKMSLLHRRLQIAVATLGQW 272
+L A+DTA+YY ++MS++ +I V G W
Sbjct: 77 SLRAEDTALYYCAKEMSVVEGYEEIVVLPTGNW 109
>AY971957-1|AAY46815.1| 1389|Homo sapiens abnormal spindle-like
microcephaly associated splice variant 2 protein.
Length = 1389
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +3
Query: 471 RGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM--TYASVVFA 644
RGM R H+K++ A I R +L R +SL+ + R + + F
Sbjct: 382 RGMKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYRATICAKHKLYQFL 441
Query: 645 HAARHPLEIPSGYSITI----LQDSRRSALVLR 731
H + + I S Y + LQ+ +R+A++++
Sbjct: 442 HLRKAAITIQSSYRRLMVKKKLQEMQRAAVLIQ 474
>AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like
microcephaly-associated protein protein.
Length = 3477
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +3
Query: 471 RGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM--TYASVVFA 644
RGM R H+K++ A I R +L R +SL+ + R + + F
Sbjct: 2396 RGMKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYRATICAKHKLYQFL 2455
Query: 645 HAARHPLEIPSGYSITI----LQDSRRSALVLR 731
H + + I S Y + LQ+ +R+A++++
Sbjct: 2456 HLRKAAITIQSSYRRLMVKKKLQEMQRAAVLIQ 2488
>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
homolog, microcephaly associated (Drosophila) protein.
Length = 3477
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +3
Query: 471 RGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM--TYASVVFA 644
RGM R H+K++ A I R +L R +SL+ + R + + F
Sbjct: 2396 RGMKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYRATICAKHKLYQFL 2455
Query: 645 HAARHPLEIPSGYSITI----LQDSRRSALVLR 731
H + + I S Y + LQ+ +R+A++++
Sbjct: 2456 HLRKAAITIQSSYRRLMVKKKLQEMQRAAVLIQ 2488
>AK001379-1|BAA91660.1| 285|Homo sapiens protein ( Homo sapiens
cDNA FLJ10517 fis, clone NT2RP2000812. ).
Length = 285
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +3
Query: 471 RGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM--TYASVVFA 644
RGM R H+K++ A I R +L R +SL+ + R + + F
Sbjct: 171 RGMKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYRATICAKHKLYQFL 230
Query: 645 HAARHPLEIPSGYSITI----LQDSRRSALVLR 731
H + + I S Y + LQ+ +R+A++++
Sbjct: 231 HLRKAAITIQSSYRRLMVKKKLQEMQRAAVLIQ 263
>AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.
Length = 3477
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +3
Query: 471 RGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM--TYASVVFA 644
RGM R H+K++ A I R +L R +SL+ + R + + F
Sbjct: 2396 RGMKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYRATICAKHKLYQFL 2455
Query: 645 HAARHPLEIPSGYSITI----LQDSRRSALVLR 731
H + + I S Y + LQ+ +R+A++++
Sbjct: 2456 HLRKAAITIQSSYRRLMVKKKLQEMQRAAVLIQ 2488
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,210,897
Number of Sequences: 237096
Number of extensions: 2768965
Number of successful extensions: 17740
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 17027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17740
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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