Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_L23
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 230 5e-64
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 73 4e-13
07_03_0387 - 17536026-17536636,17536772-17537150 31 0.96
04_03_0387 - 15251816-15251905,15251999-15252069,15252098-152523... 30 2.2
02_02_0556 - 11444512-11445577,11445730-11446007 30 2.2
01_01_0624 - 4696314-4696608,4696704-4697394,4699525-4699540,469... 30 2.2
02_02_0127 - 7038149-7038292,7038380-7038697,7038781-7038879,703... 29 5.1
11_01_0173 - 1392046-1392975 29 6.8
06_02_0109 - 11919279-11920109 29 6.8
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 29 6.8
01_06_0432 + 29310816-29311073 29 6.8
01_01_0985 - 7788318-7789571 29 6.8
07_03_0503 + 18839863-18841209 28 9.0
06_02_0186 + 12787866-12788055,12788575-12788642,12788864-127890... 28 9.0
04_04_0832 - 28507448-28507516,28507902-28507980,28508527-28509614 28 9.0
04_04_0126 + 22952577-22952871,22952912-22953519,22954125-229545... 28 9.0
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 230 bits (563), Expect(2) = 5e-64
Identities = 106/195 (54%), Positives = 138/195 (70%)
Frame = +3
Query: 117 EVYPLNKFKYARISSAVNGNVKKGVVFATYSSLIGETASNNTKYRSRLKQLLQWCGEDFD 296
+++ LNK Y++I S G + GV+F TYSSLI +++ K RSRL+QL++WCG +FD
Sbjct: 380 DLHALNKLPYSKIDSKAVG-ITTGVIFVTYSSLI----ASSEKGRSRLQQLIEWCGSEFD 434
Query: 297 GVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVR 476
G++VFDECHKAKNL P + T+TG LE+Q LP+ARVVY SATGASEPRN+ YMVR
Sbjct: 435 GLLVFDECHKAKNLIPEAGSQPTRTGKAVLEIQEMLPEARVVYCSATGASEPRNLGYMVR 494
Query: 477 LGIWGEGTPFPTFMDFINAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVSFRIEEVPL 656
LG+WG+GT F F F+ A+EK GVGA+E+VAMDMK RGMY+ R LS+ G +F E PL
Sbjct: 495 LGLWGDGTSFQNFQKFLGALEKGGVGALELVAMDMKARGMYVCRTLSYKGAAFATVEAPL 554
Query: 657 SDAFKETYDKSVALW 701
+ Y K+ W
Sbjct: 555 EERMMNMYRKAAEFW 569
Score = 33.1 bits (72), Expect(2) = 5e-64
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIE 119
+ +DLKYDA RDL D+GA +E
Sbjct: 331 IGSDLKYDARRDLDDVGAKYVE 352
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 72.5 bits (170), Expect = 4e-13
Identities = 40/97 (41%), Positives = 54/97 (55%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYARISSAVNGNVKKGVVFATYSSLIGETAS 233
+ +DLKYDA RDL D+GA ++V+PLNK Y+++ S G +K GV+F T
Sbjct: 340 IGSDLKYDARRDLDDVGAKCVQVHPLNKLPYSKLDSKAIG-IKNGVIFVT---------- 388
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCP 344
+FDG++VFDECHKAKNL P
Sbjct: 389 ----------NWFSGVDNEFDGLLVFDECHKAKNLIP 415
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 528 NAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVSFRIEEVPLSDAFKETYDKSVALW 701
N + G + +V + +K RGMY+ R LS+ GV F I E PL + Y K+ W
Sbjct: 412 NLIPDAGASPLALVKLFLKSRGMYVCRTLSYKGVDFDIVEAPLEERMMNMYRKAAEFW 469
>07_03_0387 - 17536026-17536636,17536772-17537150
Length = 329
Score = 31.5 bits (68), Expect = 0.96
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = -3
Query: 664 ASESGTSSMRKDTPWKDSWRAMYIPRS--FMSIATISMAPTPLFSTALMKSIKVGKGV-P 494
++ SGT+ + P S +PRS + A P PL + + GV P
Sbjct: 146 SATSGTTMIFATAPAPVSTPTPALPRSGTVLGAAPPLPLPLPLPPAPVFPRVSTVLGVAP 205
Query: 493 SPHIPRRTMYAMFLGSEAPVADAYTTLALGSLFCSSR 383
P +P + P A+A+TTL G+L +R
Sbjct: 206 PPPLPSPPPSTQHVSPTVPAAEAFTTLGGGTLGSGTR 242
>04_03_0387 -
15251816-15251905,15251999-15252069,15252098-15252323,
15252344-15252496,15252570-15252656,15252745-15252948,
15253038-15253159,15253354-15253507,15254329-15254434,
15254507-15254617,15256468-15256622
Length = 492
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 252 SRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALEL 392
+R ++ L+ G + D FDECHK K+ V K GLT L L
Sbjct: 307 TRKRKELEVNGVEVDRETFFDECHKTKDGRYVTDATPEKRGLTYLFL 353
>02_02_0556 - 11444512-11445577,11445730-11446007
Length = 447
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 587 ARDVHSAPA---VLPRSVLPHRGG-AALRRLQGDLRQERRAVGWRPC 715
AR ++S P V P V+P +GG + Q +L +R GWR C
Sbjct: 358 ARIIYSIPYSEWVSPVQVVPKKGGMTVVANAQNELIPQRTVTGWRMC 404
>01_01_0624 -
4696314-4696608,4696704-4697394,4699525-4699540,
4699577-4699630,4699741-4699809
Length = 374
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 105 AGKIEVYPLNKFKYARISSAVNGNVKKGVVFATYSSLIGETASNNTKYRSRLKQLLQWC 281
AG + +YP+NK K+ SAV ++ VF S L A++ ++ +++L++C
Sbjct: 265 AGPLIIYPVNKSKWDAAMSAVTPEGEE-EVFYVVSLLFSAVANDVAALEAQNRRILRFC 322
>02_02_0127 -
7038149-7038292,7038380-7038697,7038781-7038879,
7038958-7039050,7039138-7039341,7039435-7039525,
7039593-7039695,7039761-7039907,7040825-7040876,
7041003-7041138,7041846-7041911,7041981-7042045
Length = 505
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 252 SRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNK 401
+R ++ L+ G + D FDECHK KN V K ++L K
Sbjct: 313 ARKRKELEVNGVEVDRATFFDECHKTKNGRYVNDATEEKMNEVYMKLAEK 362
>11_01_0173 - 1392046-1392975
Length = 309
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 620 PRSVLPHRGGAALRRLQGDLRQERRA 697
PR++LP GG LRR L Q+RR+
Sbjct: 25 PRTLLPAGGGLLLRRPHPPLHQQRRS 50
>06_02_0109 - 11919279-11920109
Length = 276
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 659 GERHLLDAEGHSVEGQLARYVHPAQLHVHRHYLHGAHA 546
GE H LD S+ Q Y H A ++HR Y AHA
Sbjct: 82 GELHALDHRISSILQQYHHYNHVASNNIHRDY-RDAHA 118
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 549 VGAMEIVAMDMKLRGMYIARQLSFHGVSFRIEEVPLSDAFKET 677
VG ++ +++ +GM A QL F+ +S R+ + PLSD + T
Sbjct: 1544 VGRPRSISENLR-KGMTAAPQLFFYSISERLFKFPLSDHLRAT 1585
>01_06_0432 + 29310816-29311073
Length = 85
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = -2
Query: 701 PQRDALVVGLLEGVGERHLLDAEGHSVEGQLARYVHPAQLHVHRHYLHGAHASLLHGVNE 522
P R A LL G+G L+D E V+G+L R+ V R GA G +E
Sbjct: 16 PSRSARFDRLLSGLGGGPLVDIEPDKVKGELRRWARAVATMV-RQLSFGAWPEKGGGSSE 74
Query: 521 VHKGREG 501
+ +G
Sbjct: 75 QQEAGDG 81
>01_01_0985 - 7788318-7789571
Length = 417
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = -3
Query: 538 STALMKSIKVGKGVPSPHIPRRTMY 464
S A + +++G+G P+PH PRR+++
Sbjct: 34 SAAGREVVELGEGRPAPHYPRRSVF 58
>07_03_0503 + 18839863-18841209
Length = 448
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = -2
Query: 680 VGLLEGVGERHLLD----AEGHSVE--GQLARYVHPAQ--LHVHRHYLHGAHASLLHG 531
V L+E GE H A +VE ++A+++ PA L +LHG H +L HG
Sbjct: 304 VTLVESEGEDHCFHLYRPARPSAVELMDRVAQFISPASSCLQAEELHLHGRHRTLCHG 361
>06_02_0186 +
12787866-12788055,12788575-12788642,12788864-12789007,
12789112-12789268,12789344-12789366,12789487-12789495,
12789694-12790108,12790449-12790652,12790741-12791201,
12791206-12791476,12791560-12791951
Length = 777
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 596 VHSAPAVLPRSVLPHRGGAALRRLQGDLRQERRAVGWR 709
V V PR + G AA R G R RRA GWR
Sbjct: 29 VRRGDGVRPRQIRHLAGEAASRAASGGNRLGRRARGWR 66
>04_04_0832 - 28507448-28507516,28507902-28507980,28508527-28509614
Length = 411
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 647 GAALRRLQGDLRQERRAVGWRPCTVHGGAEL 739
G RR++G R R+ W P T+H +E+
Sbjct: 364 GIVKRRMKGRTRLGRKKEKWTPITMHASSEM 394
>04_04_0126 +
22952577-22952871,22952912-22953519,22954125-22954596,
22954882-22954955,22955559-22955937,22956659-22956711
Length = 626
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 323 QGKEPLPRRLREGDEDWSDGPRXXXXXXXXXXXVRVRHRGL--GAQEHGVHGAP 478
Q K PL RR E DE D R +R RH+ L Q HG AP
Sbjct: 505 QTKSPLTRRKSERDEALLDEEREEEDDEAGGDALRARHQRLLVRQQRHGGADAP 558
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,306,903
Number of Sequences: 37544
Number of extensions: 361027
Number of successful extensions: 1328
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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