Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_L22
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.059
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 2.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.059
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 87 NGKNPNXXAPXXXXPPPKVXXGXXPPPTPXXXXTPXPP 200
NG P P PPP + G PPP P P PP
Sbjct: 71 NGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 405 PPPXGGXXXXPPPGXXKKKXPPXXPXXGXXXPXXP 509
PPP G PPP PP P G P P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 129 PPPKVXXGXXPPPTPXXXXTPXPP 200
PPP G PPP P P PP
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPP 118
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 407 PPXGGXXXXPPAXXXKKKTXPPXPXXXXXPPPXPLW 514
PP G PP PP P PPP P++
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 439 GGXXXXPPXGGGPXXXKKXPXPPPXGG 359
GG PP GG P P PPP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 439 GGXXXXPPXGGGPXXXKKXPXPPPXGGG 356
GG PP GG P P PPP GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 405 PPPXGGXXXXPPPGXXK--KKXPPXXPXXGXXXPXXP 509
PPP GG PPP K PP P G P P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 99 PNXXAPXXXXPPPKVXXGXXPPPTPXXXXTPXPP 200
P P PPP G PPP P P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 90 GKNPNXXAPXXXXPP---PKVXXGXXPPPTPXXXXTPXPP 200
G P P PP P + G PPP P P PP
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 439 GGXXXXPPXGGGPXXXKKXPXPPPXGG 359
GG PP GG P P PPP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 439 GGXXXXPPXGGGPXXXKKXPXPPPXGGG 356
GG PP GG P P PPP GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 405 PPPXGGXXXXPPPGXXK--KKXPPXXPXXGXXXPXXP 509
PPP GG PPP K PP P G P P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 99 PNXXAPXXXXPPPKVXXGXXPPPTPXXXXTPXPP 200
P P PPP G PPP P P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 90 GKNPNXXAPXXXXPP---PKVXXGXXPPPTPXXXXTPXPP 200
G P P PP P + G PPP P P PP
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 439 GGXXXXPPXGGGPXXXKKXPXPPPXGG 359
GG PP GG P P PPP GG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 439 GGXXXXPPXGGGPXXXKKXPXPPPXGGG 356
GG PP GG P P PPP GG
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 405 PPPXGGXXXXPPPGXXK--KKXPPXXPXXGXXXPXXP 509
PPP GG PPP K PP P G P P
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 99 PNXXAPXXXXPPPKVXXGXXPPPTPXXXXTPXPP 200
P P PPP G PPP P P P
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 90 GKNPNXXAPXXXXPP---PKVXXGXXPPPTPXXXXTPXPP 200
G P P PP P + G PPP P P PP
Sbjct: 317 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 377 PXPXRGXXXXPPXXGPPPPPXG 312
P P G PP PPPPP G
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAG 286
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 106 PXPPXXXPPPPKXKXGXXPPXXPKXXXXPXPR 201
P PP PPPP PP P PR
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 94 KTQXPXPPXXXPPPPKXKXGXXPPXXPKXXXXPXP 198
+T P PP PPP G PP P+ P P
Sbjct: 268 RTGSPPPPPTGSPPPPPAGGSPPP--PRAGSPPPP 300
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 402 GPPPXGGXXXXPPPGXXKKKXPPXXPXXGXXXPXXP 509
G PP G PPP K++ P P G P
Sbjct: 319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 377 PXPXRGXXXXPPXXGPPPPPXG 312
P P G PP PPPPP G
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAG 307
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 106 PXPPXXXPPPPKXKXGXXPPXXPKXXXXPXPR 201
P PP PPPP PP P PR
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 94 KTQXPXPPXXXPPPPKXKXGXXPPXXPKXXXXPXP 198
+T P PP PPP G PP P+ P P
Sbjct: 289 RTGSPPPPPTGSPPPPPAGGSPPP--PRAGSPPPP 321
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 402 GPPPXGGXXXXPPPGXXKKKXPPXXPXXGXXXPXXP 509
G PP G PPP K++ P P G P
Sbjct: 340 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 377 PXPXRGXXXXPPXXGPPPPPXG 312
P P G PP PPPPP G
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAG 292
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 106 PXPPXXXPPPPKXKXGXXPPXXPKXXXXPXPR 201
P PP PPPP PP P PR
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 94 KTQXPXPPXXXPPPPKXKXGXXPPXXPKXXXXPXP 198
+T P PP PPP G PP P+ P P
Sbjct: 274 RTGSPPPPPTGSPPPPPAGGSPPP--PRAGSPPPP 306
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 402 GPPPXGGXXXXPPPGXXKKKXPPXXPXXGXXXPXXP 509
G PP G PPP K++ P P G P
Sbjct: 325 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 99 PNXXAPXXXXPPPKVXXGXXPPPTPXXXXTPXPP 200
P P PPP + PPP P P PP
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 129 PPPKVXXGXXPPPTPXXXXTPXPP 200
PPP PPP P TP PP
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 129 PPPKVXXGXXPPPTPXXXXTPXPP 200
PPP PPP P TP PP
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPP 321
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 97 TQXPXPPXXXPPPPKXKXGXXPPXXP 174
T P PP PP P+ G PP P
Sbjct: 556 TNVPIPPPPPPPLPQNLSGAPPPPPP 581
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,175,335
Number of Sequences: 27780
Number of extensions: 227881
Number of successful extensions: 2184
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1814
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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