Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_L08
(1062 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.085
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.60
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.60
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.60
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 4.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 4.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.2
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.085
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 357 PGGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXGPPPXXGGGGXPPPP 518
PGGI PPPP F + + PPP F PPP G G P PP
Sbjct: 80 PGGIPPPPPM--FAGGIPPPPPM-MGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 538 PPXPXXXGGGGXPPPPXXGGGP 473
PP P GG PPPP GG P
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIP 105
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.60
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 360 GGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXG--PPPXXGGGGXPPPPXXXGX 533
GG PPPP G PPP G PPP GG PPPP
Sbjct: 724 GGPPPPPPPGGL------PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 534 GG 539
GG
Sbjct: 778 GG 779
Score = 32.3 bits (70), Expect = 0.60
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 360 GGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXGPPPXXGGGGXPPPPXXXG 530
GG PPPP G PPP PPP G G PPPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
Frame = -3
Query: 538 PPXPXXXGG-----GGXPPPPXXGGGP 473
PP P GG GG PPPP GG P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLP 752
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.60
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 360 GGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXG--PPPXXGGGGXPPPPXXXGX 533
GG PPPP G PPP G PPP GG PPPP
Sbjct: 724 GGPPPPPPPGGL------PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 534 GG 539
GG
Sbjct: 778 GG 779
Score = 32.3 bits (70), Expect = 0.60
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 360 GGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXGPPPXXGGGGXPPPPXXXG 530
GG PPPP G PPP PPP G G PPPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
Frame = -3
Query: 538 PPXPXXXGG-----GGXPPPPXXGGGP 473
PP P GG GG PPPP GG P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLP 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.60
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 360 GGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXG--PPPXXGGGGXPPPPXXXGX 533
GG PPPP G PPP G PPP GG PPPP
Sbjct: 307 GGPPPPPPPGGL------PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Query: 534 GG 539
GG
Sbjct: 361 GG 362
Score = 32.3 bits (70), Expect = 0.60
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 360 GGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXGPPPXXGGGGXPPPPXXXG 530
GG PPPP G PPP PPP G G PPPP G
Sbjct: 323 GGPPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
Frame = -3
Query: 538 PPXPXXXGG-----GGXPPPPXXGGGP 473
PP P GG GG PPPP GG P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLP 335
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 447 PXKXFXKKXGPPPXXGGGGXPPPPXXXGXGG 539
P F GPPP GGGG P P G GG
Sbjct: 144 PQGMFNVPTGPPPLMGGGGDPRGP-PGGMGG 173
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 447 PXKXFXKKXGPPPXXGGGGXPPPPXXXGXGG 539
P F GPPP GGGG P P G GG
Sbjct: 424 PQGMFNVPTGPPPLMGGGGDPRGP-PGGMGG 453
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +3
Query: 429 LKKXPPPXKXFXKKXGPPPXXGGG----GXPPPPXXXGXGG 539
+ PPP + PPP GG G PPPP GG
Sbjct: 767 MSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGG 807
Score = 28.7 bits (61), Expect = 7.4
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Frame = +3
Query: 357 PGGIXPPPPXGXFCFXKKRXXXVFLKKXPPP--XKXFXKKXGPPPXXGGGG----XPPPP 518
P G+ PPPP G K PPP + F PPP G G PPPP
Sbjct: 721 PPGVGPPPPQGI------PPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPP 774
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 441 PPPXKXFXKKXGPPPXXGGGGXPPPPXXXGXGGE 542
PP K GPP G G P PP G GE
Sbjct: 246 PPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGE 279
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 441 PPPXKXFXKKXGPPPXXGGGGXPPPPXXXGXGGE 542
PP K GPP G G P PP G GE
Sbjct: 241 PPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGE 274
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 441 PPPXKXFXKKXGPPPXXGGGGXPPPPXXXGXGGE 542
PP K GPP G G P PP G GE
Sbjct: 241 PPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGE 274
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 4.2
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +3
Query: 357 PGGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXGPPPXXGGG-GXPPPPXXXGX 533
PGG PPPP G PP GPPP G PPP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
Query: 534 GGEXKKKG 557
GG +G
Sbjct: 466 GGNPFARG 473
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +3
Query: 357 PGGIXPPPPXGXFCFXKKRXXXVFLKKXPPPXKXFXKKXGPPPXXGGGGXPPPPXXXGXG 536
PG PPP F + PP GPP GG PPPP G
Sbjct: 387 PGAFAPPP--SAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
Query: 537 G 539
G
Sbjct: 445 G 445
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 483 PXXGGGGXPPPPXXXGXGG 539
P GGGG P PP G GG
Sbjct: 264 PMGGGGGYPQPPPQQGGGG 282
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = -3
Query: 538 PPXPXXXGGG----GXPPPPXXGGGPXF 467
PP P GGG PPPP GGP +
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSYAGGPSY 68
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +3
Query: 441 PPPXKXFXKKXGPPPXXGGG----GXPPPPXXXGXGG 539
PPP + GPPP GG G PPP GG
Sbjct: 1573 PPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGG 1609
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 441 PPPXKXFXKKXGPPPXXGGGGXPPPP 518
PPP K G PP G G PPPP
Sbjct: 240 PPPPK------GSPPLAGSGSPPPPP 259
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 441 PPPXKXFXKKXGPPPXXGGGGXPPPP 518
PPP K G PP G G PPPP
Sbjct: 261 PPPPK------GSPPLAGSGSPPPPP 280
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 441 PPPXKXFXKKXGPPPXXGGGGXPPPP 518
PPP K G PP G G PPPP
Sbjct: 246 PPPPK------GSPPLAGSGSPPPPP 265
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 9.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 538 PPXPXXXGGGGXPPPPXXGG 479
PP P GG PPPP GG
Sbjct: 579 PPPPPPMLGGPPPPPPPPGG 598
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,363,271
Number of Sequences: 27780
Number of extensions: 271448
Number of successful extensions: 3288
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2841
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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