Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_L04
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 38 0.007
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 38 0.012
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 34 0.11
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 34 0.11
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 33 0.25
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.25
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 33 0.34
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.4
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 30 1.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z77663-15|CAH04699.1| 64|Caenorhabditis elegans Hypothetical p... 29 5.5
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 5.5
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 28 7.2
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 9.5
U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead transc... 28 9.5
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 28 9.5
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 27 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 206
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 207 VPQGSALSP 233
VPQG+ LSP
Sbjct: 77 VPQGAVLSP 85
Score = 44.0 bits (99), Expect = 1e-04
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Frame = +1
Query: 235 LLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRID 408
LLF +Y+NDI +A FADDT +Y S K LQ+A + W + ++
Sbjct: 86 LLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVVDWTKGSKLT 144
Query: 409 INPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTL 588
+N +K T+ + + RR++ + PI + LG +
Sbjct: 145 LNQSK--------------TVHVTVGKRRIDF------KYHLDGYPIERKAITRDLGFLI 184
Query: 589 DSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLXNKVTLYKTCIRPVMTYASVV 759
++ F H + + A F L ++ +K + + LYKT IRP + Y +VV
Sbjct: 185 SEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKTFIRPRLEYGTVV 238
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 45 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGS 221
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 222 ALSP 233
P
Sbjct: 62 VSGP 65
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 523 PITMYD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMS 693
P T+Y +P +P + LG+ DS++TF+PHIK + + L R ++ +
Sbjct: 178 PKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLC 234
Query: 694 LXNKVTLYKTCIRPVMTYASVVFA 765
L+KT I P++ Y S V++
Sbjct: 235 PEFYCNLFKTYILPLIEYGSAVYS 258
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 38.3 bits (85), Expect = 0.007
Identities = 31/127 (24%), Positives = 53/127 (41%)
Frame = +1
Query: 238 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 417
LF+ Y+ D+P +T L +ADD +I +K ++Q + ++ ++ + I+
Sbjct: 543 LFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISA 602
Query: 418 TKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLDSR 597
KST +F P P I D PIP K LG+TL++
Sbjct: 603 EKSTVTVFSCD-----------PKEHKTKP-----DIYWMDDPIPVINAPKLLGITLNTM 646
Query: 598 MTFRPHI 618
+ H+
Sbjct: 647 TGTKDHV 653
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 36 DIAKAFDKVWHNGLIYKLYN-MGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVP 212
D+ AFDKV L L G+ ++ L + +YL R R + S+ + GVP
Sbjct: 475 DLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVP 534
Query: 213 QGSALSPXTIQFVY*RYTPVSGD 281
QGS +SP F Y + P D
Sbjct: 535 QGSVISPNLFTF-YLKDMPTQQD 556
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 37.5 bits (83), Expect = 0.012
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Frame = +1
Query: 235 LLFSLYIND--IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRID 408
LLF L+IN+ I +P +++ FADD I+++ +Q + + W + +
Sbjct: 890 LLFILFINNLLIDLAPTINISCFADDVKIFHTDPTI------IQNSIDIIVSWSKLNELP 943
Query: 409 INPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTL 588
+ PTKS + L TR N + ++ PI + V+ LG+
Sbjct: 944 LAPTKSAL--------------LALGTRNKN------QSYSVDGVPITPSSTVRDLGLIT 983
Query: 589 DSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLXNKVTLYKTCIRPVMTYASVVFA 765
D ++ F HI V + + R ++ S S LYKT + P+M Y S V+A
Sbjct: 984 DCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 84 KLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSP 233
KL G+ +++L NR+F ++ S+ + +++GVPQGS P
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGP 889
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 12 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 191
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 684 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 742
Query: 192 HVTAGVPQGSALSP 233
VT GV QG +SP
Sbjct: 743 PVTKGVRQGDPISP 756
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 12 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 191
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 423 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 481
Query: 192 HVTAGVPQGSALSP 233
VT GV QG +SP
Sbjct: 482 PVTKGVRQGDPISP 495
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 12 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 191
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 513 IPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 571
Query: 192 HVTAGVPQGSALSP 233
VT GV QG +SP
Sbjct: 572 PVTKGVRQGDPISP 585
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +1
Query: 133 TTCRTVRSDIESRERVPGPVTSQ-----PESRKAPPSPRLLFSLYINDIPRSPETHLALF 297
T TV S IES E V P++ P ++ P P+ +I I L LF
Sbjct: 332 TNSLTVVSRIESAELVASPISQPTIVDTPSEQRRDPCPKSSNMGFIPLIIMGSLASLLLF 391
Query: 298 ADDTAIYYSCRKKAL 342
+ AIY+ C+ K++
Sbjct: 392 SAGAAIYFGCKLKSM 406
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 27 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 206
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 207 VPQGSALSP 233
V QG +SP
Sbjct: 99 VRQGDPISP 107
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 544 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLXNKVTLYKT 723
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 724 CIRPVMTYASVV 759
IRP + Y +VV
Sbjct: 197 FIRPRLEYGTVV 208
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 424 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 561
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 442 KRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 561
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 469 LSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 639
++ PLP+ P+ VRP T +D IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 424 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 561
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical
protein ZK455.3 protein.
Length = 444
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 533 IVIGRTAGAGVLTRLVGRGMLSVVFGGRPLLNSTAVLFVGL 411
I+I +L LVG ++ +V GR + NST L +GL
Sbjct: 44 IIIPTIFAVIILVGLVGNALVVIVAFGRQMRNSTNTLIIGL 84
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 500 LTRLVGRGMLSVVFGGRPLLNSTAVLFVGLMSMRHFRNHCPM 375
LT VG G+L ++ PLL++ + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>Z77663-15|CAH04699.1| 64|Caenorhabditis elegans Hypothetical
protein F53F4.16 protein.
Length = 64
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 188 PSRHSRSPARLRPLPXYYSVCILTIYP 268
P H PAR+ L YY+VC LT YP
Sbjct: 4 PWYHLERPARMTLLRAYYTVCALT-YP 29
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 484 PTRRVNTPAPAVRPITMYDQPIPW 555
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +3
Query: 372 HHGTVVPEVAHRH*P-HEKHSGAIQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAH 548
HHG H H P H H G + G+ HH H SP H +P H H
Sbjct: 525 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGH 579
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 372 HHGTVVPEVAHRH*P-HEKHSGAIQKGSPSEHHAEHPSPD*ARQHPRPRRSPNH 530
HHG H H P H H G + G+ HH H SP H +P H
Sbjct: 467 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 109 TGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLF 243
T + +S TT T ++ + P T+ PE K PP P ++
Sbjct: 320 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIY 364
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 109 TGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLF 243
T + +S TT T ++ + P T+ PE K PP P ++
Sbjct: 395 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIY 439
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 383 SGSGSGASTLTPRKAQRCYSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCTTSPYRGPR 562
+GS G+ST A S T + + S G+STP P P + S G
Sbjct: 1235 TGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEM 1294
Query: 563 RSN-I*ASPSTVG 598
S+ +PST+G
Sbjct: 1295 TSHGSTQTPSTIG 1307
>U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform b protein.
Length = 280
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 161 SSRGNAFPAPSRHSRSPARLRPLPXYYSVCILTIYPGL 274
S G P+PS+ S SP P+P ++ +L + G+
Sbjct: 165 SGSGETSPSPSQPSISPPNENPMPSVQALNVLELLSGM 202
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 161 SSRGNAFPAPSRHSRSPARLRPLPXYYSVCILTIYPGL 274
S G P+PS+ S SP P+P ++ +L + G+
Sbjct: 185 SGSGETSPSPSQPSISPPNENPMPSVQALNVLELLSGM 222
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 460 NTTLSIPLPTRRVNTPAPAVRPITMYDQP----IPWAPK 564
+ TL+ PLP R PA +RP M P +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,686,386
Number of Sequences: 27780
Number of extensions: 560019
Number of successful extensions: 2474
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2464
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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