Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_L02
(857 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 283 3e-76
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 282 4e-76
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 282 4e-76
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 274 1e-73
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 274 1e-73
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 167 1e-41
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 152 5e-37
AF145692-1|AAD38667.1| 573|Drosophila melanogaster BcDNA.LD2989... 29 6.2
AE013599-1397|AAF58578.1| 573|Drosophila melanogaster CG8378-PA... 29 6.2
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 283 bits (693), Expect = 3e-76
Identities = 130/208 (62%), Positives = 152/208 (73%)
Frame = +2
Query: 29 SSMSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVV 208
+ MSHRKFSAPR +K HLT FIGYKAGMTH+V
Sbjct: 10 TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPV-HLTCFIGYKAGMTHIV 68
Query: 209 REPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRR 388
RE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRR
Sbjct: 69 READRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRR 128
Query: 389 FYKNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKK 568
FYKNWY W D+LG+KS E DF+KM+RYC V+RVIAH+Q++L+KQRQKK
Sbjct: 129 FYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 188
Query: 569 AHIMEIXLXGGTIEDKVKWAREHLEKPI 652
AH+MEI L GG+IEDKVKWAREHLEKPI
Sbjct: 189 AHVMEIQLNGGSIEDKVKWAREHLEKPI 216
Score = 59.3 bits (137), Expect = 7e-09
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
V +VF QDEMIDC+ SRWHTKKLPR +G + + SRVS TV
Sbjct: 218 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTV 277
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 278 ARAGQKG 284
Score = 36.7 bits (81), Expect = 0.041
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +1
Query: 19 RLVFQHVAQKIFSTPXMGLWDSIPKRGPVGHRGKVKAFPERRPXQTCSFDCF 174
RL ++ + FS P G PK+ HRGKVKAFP+ + CF
Sbjct: 6 RLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCF 57
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 282 bits (692), Expect = 4e-76
Identities = 130/206 (63%), Positives = 151/206 (73%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR +K HLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPV-HLTCFIGYKAGMTHIVRE 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFY
Sbjct: 60 ADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 574
KNWY W D+LG+KS E DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH
Sbjct: 120 KNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAH 179
Query: 575 IMEIXLXGGTIEDKVKWAREHLEKPI 652
+MEI L GG+IEDKVKWAREHLEKPI
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPI 205
Score = 59.3 bits (137), Expect = 7e-09
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
V +VF QDEMIDC+ SRWHTKKLPR +G + + SRVS TV
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTV 266
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 267 ARAGQKG 273
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 282 bits (692), Expect = 4e-76
Identities = 130/206 (63%), Positives = 151/206 (73%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR +K HLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPV-HLTCFIGYKAGMTHIVRE 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFY
Sbjct: 60 ADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 574
KNWY W D+LG+KS E DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH
Sbjct: 120 KNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAH 179
Query: 575 IMEIXLXGGTIEDKVKWAREHLEKPI 652
+MEI L GG+IEDKVKWAREHLEKPI
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPI 205
Score = 59.3 bits (137), Expect = 7e-09
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
V +VF QDEMIDC+ SRWHTKKLPR +G + + SRVS TV
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTV 266
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 267 ARAGQKG 273
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 274 bits (672), Expect = 1e-73
Identities = 119/164 (72%), Positives = 139/164 (84%)
Frame = +2
Query: 161 HLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRA 340
HLT FIGYKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRA
Sbjct: 29 HLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRA 88
Query: 341 LLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVR 520
L+ VWA+H+SE+CRRRFYKNWY W D+LG+KS E DF+KM+RYC V+R
Sbjct: 89 LVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIR 148
Query: 521 VIAHTQMKLLKQRQKKAHIMEIXLXGGTIEDKVKWAREHLEKPI 652
VIAH+Q++L+KQRQKKAH+MEI L GG+IEDKVKWAREHLEKPI
Sbjct: 149 VIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPI 192
Score = 59.3 bits (137), Expect = 7e-09
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
V +VF QDEMIDC+ SRWHTKKLPR +G + + SRVS TV
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTV 253
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 254 ARAGQKG 260
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 88 PKRGPVGHRGKVKAFPERRPXQTCSFDCF 174
PK+ HRGKVKAFP+ + CF
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCF 33
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 274 bits (672), Expect = 1e-73
Identities = 119/164 (72%), Positives = 139/164 (84%)
Frame = +2
Query: 161 HLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRA 340
HLT FIGYKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRA
Sbjct: 29 HLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRA 88
Query: 341 LLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVR 520
L+ VWA+H+SE+CRRRFYKNWY W D+LG+KS E DF+KM+RYC V+R
Sbjct: 89 LVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIR 148
Query: 521 VIAHTQMKLLKQRQKKAHIMEIXLXGGTIEDKVKWAREHLEKPI 652
VIAH+Q++L+KQRQKKAH+MEI L GG+IEDKVKWAREHLEKPI
Sbjct: 149 VIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPI 192
Score = 59.3 bits (137), Expect = 7e-09
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
V +VF QDEMIDC+ SRWHTKKLPR +G + + SRVS TV
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTV 253
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 254 ARAGQKG 260
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 88 PKRGPVGHRGKVKAFPERRPXQTCSFDCF 174
PK+ HRGKVKAFP+ + CF
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCF 33
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 167 bits (407), Expect = 1e-41
Identities = 78/124 (62%), Positives = 88/124 (70%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR +K HLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPV-HLTCFIGYKAGMTHIVRE 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFY
Sbjct: 60 ADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFY 119
Query: 395 KNWY 406
KNWY
Sbjct: 120 KNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 152 bits (369), Expect = 5e-37
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = +2
Query: 161 HLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRA 340
HLT FIGYKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRA
Sbjct: 29 HLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRA 88
Query: 341 LLTVWAEHMSEDCRRRFYKN 400
L+ VWA+H+SE+CRRRFYKN
Sbjct: 89 LVNVWAQHLSEECRRRFYKN 108
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 88 PKRGPVGHRGKVKAFPERRPXQTCSFDCF 174
PK+ HRGKVKAFP+ + CF
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCF 33
>AF145692-1|AAD38667.1| 573|Drosophila melanogaster BcDNA.LD29892
protein.
Length = 573
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 668 VCPR*ND*LHWCHQGQRIQRCHFSLAHKEATPVRHTRVL 784
+ P + + +C Q Q +C F L + E TP H R +
Sbjct: 297 IFPSIEELIDFCEQEQNQDKCAFDLNYNELTPEEHYRAI 335
>AE013599-1397|AAF58578.1| 573|Drosophila melanogaster CG8378-PA
protein.
Length = 573
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 668 VCPR*ND*LHWCHQGQRIQRCHFSLAHKEATPVRHTRVL 784
+ P + + +C Q Q +C F L + E TP H R +
Sbjct: 297 IFPSIEELIDFCEQEQNQDKCAFDLNYNELTPEEHYRAI 335
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,081,586
Number of Sequences: 53049
Number of extensions: 789316
Number of successful extensions: 1658
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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