Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_L02
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 253 1e-67
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 253 1e-67
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 253 1e-67
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 253 1e-67
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 197 1e-50
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 197 1e-50
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 106 2e-23
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 106 2e-23
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.2
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 7.4
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 253 bits (620), Expect = 1e-67
Identities = 118/206 (57%), Positives = 143/206 (69%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR G + K+ HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGF-TPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRD 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 574
NW WQDE G+K E DF K+ +YCS +RVIAHTQMK+L++RQKKAH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 575 IMEIXLXGGTIEDKVKWAREHLEKPI 652
++EI + GGTIE KV WAREHLEK +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQV 205
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
VD+VFAQDEMID I SRWHTKKLPR +G + + SRV+FTV
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 267 ARAGQKG 273
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 253 bits (620), Expect = 1e-67
Identities = 118/206 (57%), Positives = 143/206 (69%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR G + K+ HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGF-TPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRD 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 574
NW WQDE G+K E DF K+ +YCS +RVIAHTQMK+L++RQKKAH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 575 IMEIXLXGGTIEDKVKWAREHLEKPI 652
++EI + GGTIE KV WAREHLEK +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQV 205
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
VD+VFAQDEMID I SRWHTKKLPR +G + + SRV+FTV
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 267 ARAGQKG 273
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 253 bits (620), Expect = 1e-67
Identities = 118/206 (57%), Positives = 143/206 (69%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR G + K+ HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGF-TPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRD 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 574
NW WQDE G+K E DF K+ +YCS +RVIAHTQMK+L++RQKKAH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 575 IMEIXLXGGTIEDKVKWAREHLEKPI 652
++EI + GGTIE KV WAREHLEK +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQV 205
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
VD+VFAQDEMID I SRWHTKKLPR +G + + SRV+FTV
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 267 ARAGQKG 273
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 253 bits (620), Expect = 1e-67
Identities = 118/206 (57%), Positives = 143/206 (69%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR G + K+ HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGF-TPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRD 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 574
NW WQDE G+K E DF K+ +YCS +RVIAHTQMK+L++RQKKAH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 575 IMEIXLXGGTIEDKVKWAREHLEKPI 652
++EI + GGTIE KV WAREHLEK +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQV 205
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
VD+VFAQDEMID I SRWHTKKLPR +G + + SRV+FTV
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 267 ARAGQKG 273
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 197 bits (480), Expect = 1e-50
Identities = 93/169 (55%), Positives = 111/169 (65%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR G + K+ HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGF-TPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRD 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQM 541
NW WQDE G+K E DF K+ +YCS +RVIAHTQM
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/64 (43%), Positives = 33/64 (51%)
Frame = +3
Query: 666 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTVXRA 845
V A +MID I SRWHTKKLPR +G + + SRV+FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 846 GXKG 857
G KG
Sbjct: 222 GQKG 225
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 751 RSYPGKTHKGLRKVACIGAWH 813
+ P KTHKGLRKVACIGAWH
Sbjct: 190 KKLPRKTHKGLRKVACIGAWH 210
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 197 bits (480), Expect = 1e-50
Identities = 93/169 (55%), Positives = 111/169 (65%)
Frame = +2
Query: 35 MSHRKFSAPRSWVYGILSQKEXXXXXXXXXXXXXXXXXXXXXHLTAFIGYKAGMTHVVRE 214
MSHRKFSAPR G + K+ HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGF-TPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRD 59
Query: 215 PDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 394
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 395 KNWYXXXXXXXXXXXXXWQDELGRKSXEKDFKKMIRYCSVVRVIAHTQM 541
NW WQDE G+K E DF K+ +YCS +RVIAHTQM
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/64 (43%), Positives = 33/64 (51%)
Frame = +3
Query: 666 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTVXRA 845
V A +MID I SRWHTKKLPR +G + + SRV+FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 846 GXKG 857
G KG
Sbjct: 222 GQKG 225
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 751 RSYPGKTHKGLRKVACIGAWH 813
+ P KTHKGLRKVACIGAWH
Sbjct: 190 KKLPRKTHKGLRKVACIGAWH 210
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 106 bits (255), Expect = 2e-23
Identities = 46/69 (66%), Positives = 57/69 (82%)
Frame = +2
Query: 446 WQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIXLXGGTIEDKVKW 625
WQDE G+K E DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EI + GGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 626 AREHLEKPI 652
AREHLEK +
Sbjct: 99 AREHLEKQV 107
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
VD+VFAQDEMID I SRWHTKKLPR +G + + SRV+FTV
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 168
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 169 ARAGQKG 175
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3
Query: 51 FQHPXHGSMGFYPKKRSR 104
F P HG MGF PKKRSR
Sbjct: 6 FSAPRHGHMGFTPKKRSR 23
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 106 bits (255), Expect = 2e-23
Identities = 46/69 (66%), Positives = 57/69 (82%)
Frame = +2
Query: 446 WQDELGRKSXEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIXLXGGTIEDKVKW 625
WQDE G+K E DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EI + GGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 626 AREHLEKPI 652
AREHLEK +
Sbjct: 99 AREHLEKQV 107
Score = 61.7 bits (143), Expect = 6e-10
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 657 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*DTQGS*ESCLHWSXASSRVSFTV 836
VD+VFAQDEMID I SRWHTKKLPR +G + + SRV+FTV
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 168
Query: 837 XRAGXKG 857
RAG KG
Sbjct: 169 ARAGQKG 175
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3
Query: 51 FQHPXHGSMGFYPKKRSR 104
F P HG MGF PKKRSR
Sbjct: 6 FSAPRHGHMGFTPKKRSR 23
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 278 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 406
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 259 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 426
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +3
Query: 561 KRRLTLWKSXLXVVPSRTK*NGPENIWRNLSL------VDSVFAQD-EMIDC 695
K RL L K +V S K GP+ W N+ L ++S+F D + IDC
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHETSIRINSLFYVDGKKIDC 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,377,493
Number of Sequences: 27780
Number of extensions: 398049
Number of successful extensions: 984
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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