Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_L01
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.2  
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166...    30   2.2  
03_01_0515 - 3864796-3865425                                           28   6.7  
12_01_0655 + 5546293-5546478,5546760-5546877,5550697-5550776,555...    28   8.8  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    28   8.8  
08_01_0146 + 1148535-1148577,1148650-1148918,1148924-1149409,114...    28   8.8  
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647...    28   8.8  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    28   8.8  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/59 (30%), Positives = 18/59 (30%)
 Frame = +1

Query: 448 PQPPXKPXXXGXXXPXGGXRAXXKISXGPXXXXPPXKXXXXXKPPPPXKXPXXPXXXXP 624
           P PP KP       P     A       P    PP        PPPP K P  P    P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPP---PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370


>02_05_0110 +
           25914110-25915006,25915726-25915797,25916411-25916699,
           25916864-25916949,25917267-25917490,25917674-25917740,
           25917830-25917889,25917995-25918078,25918475-25918555
          Length = 619

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 268 LDDEAFGYL-KRVIVTPAVYPRLLEFLHVDIQSTG 167
           LDDE   YL  R  V   +  RLL+F++VD  STG
Sbjct: 279 LDDEDISYLTNRAAVYIEMGKRLLKFIYVDPSSTG 313


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/54 (25%), Positives = 17/54 (31%)
 Frame = +1

Query: 448 PQPPXKPXXXGXXXPXGGXRAXXKISXGPXXXXPPXKXXXXXKPPPPXKXPXXP 609
           P PP +        P     +    + GP    PP        PPPP   P  P
Sbjct: 40  PSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPP 93


>12_01_0655 +
           5546293-5546478,5546760-5546877,5550697-5550776,
           5551329-5552345,5552523-5553344,5553528-5553800
          Length = 831

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +1

Query: 49  CTTAVQRSAQNWHGQGESDCLIKTKHCDGPRGC*RNVISAQCS 177
           C T   RS  N H   +  CL+  +H     G   NVI  +CS
Sbjct: 242 CDTERARSDTNEHNIYDGCCLLDVQHTQSFPGNGANVIPTKCS 284


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +1

Query: 529 GPXXXXPPXKXXXXXKPPPPXKXPXXPXXXXPXXG 633
           GP    PP        PPPP   P  P    P  G
Sbjct: 135 GPGQEPPPPHVPKAAPPPPPPPPPHAPPGPPPTKG 169


>08_01_0146 +
           1148535-1148577,1148650-1148918,1148924-1149409,
           1149543-1149905
          Length = 386

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 185 NVKKFKQARVNGGSNYDSLKVAKCLVI*LVTRMNGLTRFPLVPIYYLA 328
           N+ K K+  +NGG +Y+S + A  LV+    R + + R P   I Y+A
Sbjct: 198 NITKLKRD-INGGQSYESYRPAHLLVL---LRFSQIWRMPEREINYVA 241


>04_04_0433 +
           25163111-25163471,25163943-25164154,25164420-25164701,
           25164794-25164916,25165511-25165664,25165754-25165965,
           25166143-25166212,25166294-25166424
          Length = 514

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +1

Query: 49  CTTAVQRSAQNWHGQGESDCLIKTKHCDGPRGC-*RNVISAQCS 177
           CT++ +R A  W G G    L    HC  P       V+S +CS
Sbjct: 26  CTSSSRRRASPWGGAGRLIRLRLRGHCPSPASARAARVVSPRCS 69


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/43 (30%), Positives = 14/43 (32%)
 Frame = +1

Query: 496 GGXRAXXKISXGPXXXXPPXKXXXXXKPPPPXKXPXXPXXXXP 624
           GG +     S  P    PP        PPPP   P  P    P
Sbjct: 337 GGTQENNATSDAPKLMPPPPPPPPPPPPPPPPPPPRPPPPPPP 379


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,279,141
Number of Sequences: 37544
Number of extensions: 286788
Number of successful extensions: 675
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)