Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_K12
(884 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 238 4e-65
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 238 4e-65
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.9
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 238 bits (583), Expect = 4e-65
Identities = 111/141 (78%), Positives = 121/141 (85%)
Frame = +2
Query: 230 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 409
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 410 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYRQVFLGGVDKKTQFWRYFXXXXX 589
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKY+QVFLGGVDK TQF RYF
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 590 XXXXXXXTSLCFVYPLDFART 652
TSLCFVYPLDFART
Sbjct: 121 SGGAAGATSLCFVYPLDFART 141
Score = 118 bits (284), Expect = 7e-29
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 652 RLAADVGKGDGQREFSGLGNXISKIFKSDGLIGLYRRFGVSVQGIIIYRASYFGFYXTXR 831
RLAADVGK G+REF+GLGN ++KIFK+DG+ GLYR FGVSVQGIIIYRA+YFGFY T R
Sbjct: 142 RLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTAR 201
Query: 832 GMXPDPKNHP 861
GM PDPK P
Sbjct: 202 GMLPDPKKTP 211
Score = 29.9 bits (64), Expect = 0.033
Identities = 26/102 (25%), Positives = 43/102 (42%)
Frame = +2
Query: 257 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 436
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 437 LSFWRGNFANVIRYFPTQALNFAFKDKYRQVFLGGVDKKTQF 562
+RG +V +A F F D R + KKT F
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKTPF 212
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 317 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 475
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 238 bits (583), Expect = 4e-65
Identities = 111/141 (78%), Positives = 121/141 (85%)
Frame = +2
Query: 230 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 409
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 410 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYRQVFLGGVDKKTQFWRYFXXXXX 589
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKY+QVFLGGVDK TQF RYF
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 590 XXXXXXXTSLCFVYPLDFART 652
TSLCFVYPLDFART
Sbjct: 121 SGGAAGATSLCFVYPLDFART 141
Score = 118 bits (284), Expect = 7e-29
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 652 RLAADVGKGDGQREFSGLGNXISKIFKSDGLIGLYRRFGVSVQGIIIYRASYFGFYXTXR 831
RLAADVGK G+REF+GLGN ++KIFK+DG+ GLYR FGVSVQGIIIYRA+YFGFY T R
Sbjct: 142 RLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTAR 201
Query: 832 GMXPDPKNHP 861
GM PDPK P
Sbjct: 202 GMLPDPKKTP 211
Score = 29.9 bits (64), Expect = 0.033
Identities = 26/102 (25%), Positives = 43/102 (42%)
Frame = +2
Query: 257 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 436
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 437 LSFWRGNFANVIRYFPTQALNFAFKDKYRQVFLGGVDKKTQF 562
+RG +V +A F F D R + KKT F
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKTPF 212
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 317 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 475
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 496 ERLGREVPDDVGEVTTPE 443
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 496 ERLGREVPDDVGEVTTPE 443
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,460
Number of Sequences: 438
Number of extensions: 5589
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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