BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_J24
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 281 2e-75
AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 281 3e-75
DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein. 69 3e-11
DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein. 66 2e-10
AK097297-1|BAC04995.1| 261|Homo sapiens protein ( Homo sapiens ... 32 2.4
BC052586-1|AAH52586.1| 901|Homo sapiens schlafen family member ... 31 4.2
AL831964-1|CAD38606.2| 901|Homo sapiens hypothetical protein pr... 31 4.2
AK092241-1|BAC03835.1| 901|Homo sapiens protein ( Homo sapiens ... 31 4.2
AK074184-1|BAB85010.1| 820|Homo sapiens FLJ00257 protein protein. 31 4.2
L06155-1|AAC13541.1| 360|Homo sapiens melanocortin receptor pro... 31 5.6
BC098351-1|AAH98351.1| 360|Homo sapiens melanocortin 3 receptor... 31 5.6
BC098169-1|AAH98169.1| 360|Homo sapiens melanocortin 3 receptor... 31 5.6
BC096737-1|AAH96737.1| 360|Homo sapiens melanocortin 3 receptor... 31 5.6
BC096702-1|AAH96702.1| 360|Homo sapiens melanocortin 3 receptor... 31 5.6
BC069599-1|AAH69599.1| 360|Homo sapiens melanocortin 3 receptor... 31 5.6
BC069105-1|AAH69105.1| 360|Homo sapiens melanocortin 3 receptor... 31 5.6
AY227893-1|AAO72726.1| 360|Homo sapiens melanocortin 3 receptor... 31 5.6
AL139824-1|CAC15480.2| 323|Homo sapiens melanocortin 3 receptor... 31 5.6
>BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor
homolog (S. cerevisiae) protein.
Length = 586
Score = 281 bits (689), Expect = 2e-75
Identities = 148/292 (50%), Positives = 174/292 (59%), Gaps = 28/292 (9%)
Frame = +1
Query: 58 GKDINPHIPQYIASAPWYYGTSG-PTLKHQRPQEDREGQFTKLDKYYNKGVDVTKVATKF 234
GKDINPHIPQYI+S PWY S PTLKHQRPQ +++ QF+ ++Y +GV V TK+
Sbjct: 56 GKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSVITKY 115
Query: 235 RKGACENCGAMTHKKKDCLERPRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDP 414
RKGACENCGAMTHKKKDC ERPR++GAKFT IA DE QP L YDGKRDRWNGY+P
Sbjct: 116 RKGACENCGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNP 175
Query: 415 EQHKAIIEEYQKV---------EEAKRELRAKKL------------EIDPTAXXXXXXXX 531
E+H I+EEY KV ++ + EL + KL E +P +
Sbjct: 176 EEHMKIVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQTEKDHNS 235
Query: 532 XXXXXXXXXXX--MPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYXPKTRSMRDN 705
MPG DSK+RITVRNLRIRED AKYLRNLDPNSAYY PKTR+MR+N
Sbjct: 236 EDEDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMREN 295
Query: 706 PTPNV----PESEYGGENSVRVSXXXXXXXXXXCSRWEGRXXGLXLHLXAXP 849
P N E Y G+N VR + WE G +HL A P
Sbjct: 296 PYANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADP 347
>AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor
SLU7 protein.
Length = 586
Score = 281 bits (688), Expect = 3e-75
Identities = 147/292 (50%), Positives = 174/292 (59%), Gaps = 28/292 (9%)
Frame = +1
Query: 58 GKDINPHIPQYIASAPWYYGTSG-PTLKHQRPQEDREGQFTKLDKYYNKGVDVTKVATKF 234
GKDINPHIPQYI+S PWY S PTLKHQRPQ +++ QF+ ++Y +GV + TK+
Sbjct: 56 GKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSIITKY 115
Query: 235 RKGACENCGAMTHKKKDCLERPRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDP 414
RKGACENCGAMTHKKKDC ERPR++GAKFT IA DE QP L YDGKRDRWNGY+P
Sbjct: 116 RKGACENCGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNP 175
Query: 415 EQHKAIIEEYQKV---------EEAKRELRAKKL------------EIDPTAXXXXXXXX 531
E+H I+EEY KV ++ + EL + KL E +P +
Sbjct: 176 EEHMKIVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQTEKDHNS 235
Query: 532 XXXXXXXXXXX--MPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYXPKTRSMRDN 705
MPG DSK+RITVRNLRIRED AKYLRNLDPNSAYY PKTR+MR+N
Sbjct: 236 EDEDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMREN 295
Query: 706 PTPNV----PESEYGGENSVRVSXXXXXXXXXXCSRWEGRXXGLXLHLXAXP 849
P N E Y G+N VR + WE G +HL A P
Sbjct: 296 PYANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADP 347
>DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein.
Length = 102
Score = 68.5 bits (160), Expect = 3e-11
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +1
Query: 58 GKDINPHIPQYIASAPWYYGTS-GPTLKHQRPQEDREGQFTKLDKYY 195
GKDINPHIPQYI+S PWY S PTLKHQRPQ +++ QF+ ++Y
Sbjct: 56 GKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWY 102
>DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein.
Length = 101
Score = 65.7 bits (153), Expect = 2e-10
Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = +1
Query: 58 GKDINPHIPQYIASAPWYYGTS-GPTLKHQRPQEDREGQFT 177
GKDINPHIPQYI+S PWY S PTLKHQRPQ +++ QF+
Sbjct: 56 GKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFS 96
>AK097297-1|BAC04995.1| 261|Homo sapiens protein ( Homo sapiens
cDNA FLJ39978 fis, clone SPLEN2029380. ).
Length = 261
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 315 CTYFSRSL-QAILLLVCHRTTVFTCPFPEFCCYFCHINSFIVIFIELCELSLSVLLRPLM 139
C FS SL I+L C ++F P CC F +I +F+ IF+ C + L P
Sbjct: 36 CLTFSVSLCPCIVLSACLSASLFLPP----CCVFHYIVAFLSIFLIHCHYVSAFFLSPCF 91
Query: 138 F 136
F
Sbjct: 92 F 92
>BC052586-1|AAH52586.1| 901|Homo sapiens schlafen family member 11
protein.
Length = 901
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 622 REDTAKYLRNLDPNSAYYXPKTRSMRDNPTPNVP 723
RE+ + +RN DP + Y + + +R NP+ N+P
Sbjct: 724 REELTRIVRNADPIAKYLQKEMQVIRSNPSFNIP 757
>AL831964-1|CAD38606.2| 901|Homo sapiens hypothetical protein
protein.
Length = 901
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 622 REDTAKYLRNLDPNSAYYXPKTRSMRDNPTPNVP 723
RE+ + +RN DP + Y + + +R NP+ N+P
Sbjct: 724 REELTRIVRNADPIAKYLQKEMQVIRSNPSFNIP 757
>AK092241-1|BAC03835.1| 901|Homo sapiens protein ( Homo sapiens
cDNA FLJ34922 fis, clone NT2RP7003084, weakly similar to
Mus musculus schlafen3 (Slfn3) mRNA. ).
Length = 901
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 622 REDTAKYLRNLDPNSAYYXPKTRSMRDNPTPNVP 723
RE+ + +RN DP + Y + + +R NP+ N+P
Sbjct: 724 REELTRIVRNADPIAKYLQKEMQVIRSNPSFNIP 757
>AK074184-1|BAB85010.1| 820|Homo sapiens FLJ00257 protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 622 REDTAKYLRNLDPNSAYYXPKTRSMRDNPTPNVP 723
RE+ + +RN DP + Y + + +R NP+ N+P
Sbjct: 643 REELTRIVRNADPIAKYLQKEMQVIRSNPSFNIP 676
>L06155-1|AAC13541.1| 360|Homo sapiens melanocortin receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC098351-1|AAH98351.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC098169-1|AAH98169.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC096737-1|AAH96737.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC096702-1|AAH96702.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC069599-1|AAH69599.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC069105-1|AAH69105.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>AY227893-1|AAO72726.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>AL139824-1|CAC15480.2| 323|Homo sapiens melanocortin 3 receptor
protein.
Length = 323
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 267 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 124
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 261 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 303
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,820,126
Number of Sequences: 237096
Number of extensions: 1949189
Number of successful extensions: 5824
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5814
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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