Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_J02
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 43 6e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.18
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.24
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.97
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.97
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 23 1.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.7
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 2.2
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 3.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.2
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.8
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 9.0
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 9.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 25 9.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 9.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.7 bits (96), Expect = 6e-05
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
PPP PPPPPP PPPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
PP P PPPPP PPPPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.034
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 534 PPPPPXFXXFXPPPPPPPP 590
PPPP PPPPPPPP
Sbjct: 765 PPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.078
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 484 GGGGXPPPPXXXXXXXPPPPPP 549
GG PPPP PPPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPP 780
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPP---PPXFXFXXPPPPPPP 588
PPPP P P PP PPPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 532 PPPPPPXFXFXXPPPPPPP 588
PPPPPP P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIP 750
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 502 PPPXXXXXXXPPPPPPXFXFXXPPPPP 582
P P PPP P PPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 534 PPPPPXFXXFXPPPPPPPPXXXXXKK 611
PPPPP F PPPPPPP +K
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 37.1 bits (82), Expect = 0.003
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 532 PPPPPPXFXFXXPPPPPPPXXXXXXKK 612
PPPPPP F PPPPPP +K
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 35.1 bits (77), Expect = 0.011
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 532 PPPPPPXFXFXXPPPPPPPXXXXXXKK 612
PPPPPP F P PPPP KK
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 29.5 bits (63), Expect = 0.55
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPP 549
PPPP PPPPPP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 484 GGGGXPPPPXXXXXXXPPPPPP 549
G PPPP PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXF 555
PPP PPPPPP +
Sbjct: 14 PPPGFEPPSQPPPPPPPGY 32
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.18
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
PPPP PP PPPPPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.7 bits (61), Expect = 0.97
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPP 582
PPPP P PP PPPPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
PP P PP P PPP PPP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
PPPP P PP PPPPPP
Sbjct: 340 PPPPRSNAAGSIPLPPQG---RSAPPPPPP 366
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 490 GGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPP 585
G P PP PPPPPP PPP
Sbjct: 349 GSIPLPPQGRS--APPPPPPRSAPSTGRQPPP 378
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.24
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
P PP PPP P P PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
PPPP P PP PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 487 GGGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
G PPPP PPPP PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect = 0.97
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 561 FXPPPPPPPP 590
F PPPPPPPP
Sbjct: 944 FPPPPPPPPP 953
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 546 PXFXXFXPPPPPPP 587
P F PPPPPP
Sbjct: 232 PIFSSSSTPPPPPP 245
Score = 23.0 bits (47), Expect(2) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 567 PPPPPPPP 590
PPPPPP P
Sbjct: 240 PPPPPPRP 247
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
PPP P + PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 567 PPPPPPPP 590
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 567 PPPPPPP 587
PPPPPPP
Sbjct: 238 PPPPPPP 244
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 543 PPXFXXFXPPPPPP 584
P + PPPPPP
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 2.2
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 561 FXPPPPPPPP 590
+ PPPPPPPP
Sbjct: 368 YSPPPPPPPP 377
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 490 GGXPPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
GG PPPP PPPPP F P P
Sbjct: 303 GGLPPPP--------PPPPPSNDFWKDSNEPAP 327
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 567 PPPPPPPP 590
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 567 PPPPPPPP 590
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 567 PPPPPPPP 590
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 569 PPPPPPPXXXXXKK 610
PPPPPPP KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -3
Query: 584 GGGGGGXKXXKXG-GGGGGXXXXXXXGGGGXP 492
GGG GG + G GGG G G GG P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 584 GGGGGGXKXXKXGGGGGGXXXXXXXGGGGXP 492
GGG GG G GGG GG G P
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 538 PPPPXFXFXXPPPPPPP 588
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPP 582
PPPP P PPP + P P
Sbjct: 48 PPPPSVDHSAPPSGPPPSYSNSAAPATP 75
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 537 PPPPXFXXFXPPPPPPP 587
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 540 PPPXFXXFXPPPPPPPP 590
P P PPPPPP P
Sbjct: 347 PTPQVQGSRPPPPPPMP 363
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 499 PPPPXXXXXXXPPPPPPXFXFXXPPPPPPP 588
P P PPPPP P PP P
Sbjct: 732 PTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 587 GGGGGGGXKXXKXGGGGGGXXXXXXXGGG 501
G GG GG + GGG GG GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGG 52
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 6/37 (16%)
Frame = +1
Query: 493 GXPPPPXXXXXXXPPPPP------PXFXFXXPPPPPP 585
G PP P P PPP P PP PPP
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,718,771
Number of Sequences: 5004
Number of extensions: 28144
Number of successful extensions: 562
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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