Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_I15
(898 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 5e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 4e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 4e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 28 0.13
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 28 0.13
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.54
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 5.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 5.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 5.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.0 bits (119), Expect = 7e-09
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Frame = +3
Query: 60 VIASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESES 218
+I SA C + D LL+ Y+R P S +VV L L L N+++
Sbjct: 8 LILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQIL 67
Query: 219 TVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RA 392
T + L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 68 TTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKA 125
Query: 393 RVSNNGSVSW 422
+ G V W
Sbjct: 126 ILHYTGKVLW 135
Score = 25.8 bits (54), Expect = 0.54
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMD 540
+P D QTC KFGS ++ ++D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.4 bits (110), Expect = 9e-08
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Frame = +3
Query: 48 LLTCVIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIR 206
++ V+ + C + D LL+ Y++ P + LT+ ++ N++
Sbjct: 8 IMWIVLVLISGCSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLK 67
Query: 207 ESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDY 380
T + ++ +W D +L W+ E+G L V S+ +WRPD+VL NA
Sbjct: 68 NQIMTTNLW--VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTL 125
Query: 381 ALRARVSNNGSVSW 422
A +A ++ G V W
Sbjct: 126 ATKATLNYTGRVEW 139
Score = 26.6 bits (56), Expect = 0.31
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +3
Query: 81 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 245
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 246 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 347
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 25.4 bits (53), Expect = 0.71
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEM 537
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 48.0 bits (109), Expect = 1e-07
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Frame = +3
Query: 51 LTCVIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 209
++C++A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 210 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 386
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 387 ----RARVSNNGSVSW 422
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+ ++ +P D QTC KFGS ++ +D
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 372 GDYALRARVSNNGS 413
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI 549
+P D Q C KFGS ++ +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 372 GDYALRARVSNNGS 413
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI 549
+P D Q C KFGS ++ +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGS 413
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI 549
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.0 bits (104), Expect = 5e-07
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Frame = +3
Query: 108 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 266
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 267 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 422
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 27.1 bits (57), Expect = 0.23
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+ ++ +P D Q+C KFGS +N ++D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.6 bits (103), Expect = 6e-07
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Frame = +3
Query: 45 FLLTCVIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESES 218
+ L+ ++ A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 12 WFLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 70
Query: 219 TVRIQAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYA 383
+I ++ +W D +L W E+G L V S+ +WRPD+VL NA A
Sbjct: 71 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLA 130
Query: 384 LRARVSNNGSVSW 422
+A + + G V W
Sbjct: 131 TKATIYHQGLVEW 143
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGS 413
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI 549
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGS 413
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI 549
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGS 413
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI 549
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGS 413
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI 549
+P D Q C KFGS ++ +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGS 413
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 457 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 549
M + +P D Q C KFGS ++ +++D V+
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 254
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 255 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 353
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 30.3 bits (65), Expect = 0.025
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFKFGS 513
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +3
Query: 162 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 338
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 339 VVLLNAAATTAGDYALRAR--VSNNGSVSW 422
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.2 bits (97), Expect = 3e-06
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 332
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 333 PDVVLLNAAATTAGDYALRAR----VSNNGSVSW 422
PD+VL N A G+Y +R + + NG V W
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
Score = 32.7 bits (71), Expect = 0.005
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVI--DKRIYSM---FXSGAWDV 594
+P D QTC KFGS N D++ + +K + + SG WD+
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.7 bits (96), Expect = 4e-06
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Frame = +3
Query: 45 FLLTCVIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESES 218
+ L+ ++ A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 12 WFLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 70
Query: 219 TVRIQAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL 386
+I ++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y +
Sbjct: 71 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEV 127
Query: 387 ----RARVSNNGSVSW 422
+A V +G V W
Sbjct: 128 TLMTKATVYYSGLVVW 143
Score = 26.6 bits (56), Expect = 0.31
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 454 SMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.7 bits (96), Expect = 4e-06
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Frame = +3
Query: 108 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 272
+++ LL TY+ P +V++ L L ++ E + L++ W D +
Sbjct: 27 LLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMR 86
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 87 WNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 27.5 bits (58), Expect = 0.18
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFXSGAWDV 594
+P D Q C KFGS ++ ++D + I S +G WD+
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.7 bits (86), Expect = 7e-05
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Frame = +3
Query: 84 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 251
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 252 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 419
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 420 WDKALGH 440
++ H
Sbjct: 159 CVPSVKH 165
Score = 35.5 bits (78), Expect = 7e-04
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 469 NWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM 570
+WP D C FGS +H+ +E++ +DK+ + M
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +3
Query: 108 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 266
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 267 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 353
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.002
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 96 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 260
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 261 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 353
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
Score = 26.6 bits (56), Expect = 0.31
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFKFGS 513
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.9 bits (59), Expect = 0.13
Identities = 9/41 (21%), Positives = 23/41 (56%)
Frame = +1
Query: 424 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 546
+ +L + +M+ +++P+D Q C+ S H + ++ F+
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.9 bits (59), Expect = 0.13
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 552
+L + +M +P+D Q C + S H +DEM F D
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.8 bits (54), Expect = 0.54
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 430 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 537
RL + ++L+ +P D+Q C F S HN +M
Sbjct: 135 RLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 104 GQ*CCVFAFCRTSYNTSEEKXVTRII 27
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 162 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 323
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 324 LWRPDVVLLNA 356
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 5.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 305 PSAAAPLPCVPTQS 264
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.6
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 543 EIHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 367
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRGIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 366 WLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 241
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLGSRSRSFQ 225
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,947
Number of Sequences: 438
Number of extensions: 5411
Number of successful extensions: 78
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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