Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_I09
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 34 0.17
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.70
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.70
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 31 0.93
06_01_0881 + 6754600-6754681,6754742-6755284,6755461-6755523,675... 31 1.2
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 31 1.6
12_01_0524 - 4167867-4168445 29 3.7
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 29 3.7
07_03_1747 + 29188568-29188715,29188793-29189541 29 4.9
02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058 29 4.9
02_04_0170 + 20576149-20576889 29 4.9
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 6.5
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 6.5
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.5
04_04_1126 + 31095651-31096115 29 6.5
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 28 8.6
07_03_1136 + 24218601-24218734,24218769-24219906 28 8.6
07_01_0080 + 587674-588510 28 8.6
04_01_0530 - 6928528-6929500,6929514-6930964 28 8.6
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.6
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.6
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 8.6
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 343 HQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQM-QGQVDYDFGVGG 179
H P AAA P VP++ P L + S GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +3
Query: 696 VPXVXPRXPPXAXXLGGRXPXXPXGARXPXPPXX--AXAAXPXXPPXGGSXVHSXXXA 863
+P + P PP G P GA P PP P PP GG H A
Sbjct: 1081 IPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPA 1138
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.70
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = +3
Query: 630 PXLXXAGANPGPVAKVXARXXXVPXVXPRXPPXAXXLGGRXPXXPXGARXPXPPXXAX-- 803
P A A P P A P P PP A G P P G P PP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAK--GPPPPPPPKGPSPPPPPPPGGKK 374
Query: 804 AAXPXXPPXGGS 839
P PP GG+
Sbjct: 375 GGPPPPPPKGGA 386
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 651 ANPGPVAKVXARXXXVPXVXPRXPPXAXXLGGRXPXXPXGARXPXPPXXAXAAXPXXPPX 830
A P P A P P+ P G P P P PP + P PP
Sbjct: 312 APPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371
Query: 831 G 833
G
Sbjct: 372 G 372
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 712 PGXPPGQXXXAAGAXVXPGVPXXXGPRXXPXPPXPXTPXPGVPA 843
P PP A A P P P+ P PP P P P PA
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPP----PKAAPPPPPPKGPPPPPPA 350
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 724 PGQXXXAAGAXVXPGVPXXXGPRXXPXPPXPXTPXPGVPAFTLXXXP 864
PG GA + PG+P GP P P P P V L P
Sbjct: 139 PGVYLQQPGAALPPGMPRYPGPYPMMRPGFPPRPMPPVGVMPLQRPP 185
>06_01_0881 +
6754600-6754681,6754742-6755284,6755461-6755523,
6755653-6755666
Length = 233
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +1
Query: 670 RRWXXAXXXXXMSFPGXPPGQXXXAAGAXVXPGVPXXXGPRXXPXPPXPXTPXPGVP 840
RR A PG PP Q G P +P P P P P PG+P
Sbjct: 13 RRRLAAAIGSRQGRPGLPPLQTIQIPGLPPLPPLPTIQIPCLPPLQPLPTIQIPGLP 69
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 714 RXPPXAXXLGGRXPXXPXGARXPXPPXXAXAAXPXXPPXGG 836
R PP P P GAR P P AA P PP GG
Sbjct: 82 RGPPVPASPPAAAPILPSGARGPPVPGSPPAAAP-VPPSGG 121
>12_01_0524 - 4167867-4168445
Length = 192
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -1
Query: 340 QPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVR 161
QPS+AA P + + + + YSH G + S + G + G GGG P V
Sbjct: 104 QPSSAAVAPLPSSTNLKSAVRSAMGSYSHSGTRRVHFGDSTVLG--EKAAGAGGGEPAV- 160
Query: 160 CEERVDHEGQ*C 125
EE + E + C
Sbjct: 161 VEEVEEEEEKEC 172
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 703 MSFPGXPPGQXXXAAGAXVXP-GVPXXXGPRXXPXPPXPXTPXPGVPAF 846
+SFPG P P GVP G P P P PG+P +
Sbjct: 75 LSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRPPILPAPGIPGY 123
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 396 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSS 539
PPP TT++ V L TA + S + QF+C+ TTC + S S
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESES 257
>02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058
Length = 365
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +3
Query: 663 PVAKVXARXXXVPXVXPRXPPXAXXLGGRXPXXPXGARXPXPPXXAXAAXPXXPP 827
PV + AR P P PP A G P A P PP AA PP
Sbjct: 212 PVPQRAARGATAPTPRPVAPPQA----GTWPLPAPAAMPPPPPPPTGAAAVAPPP 262
>02_04_0170 + 20576149-20576889
Length = 246
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +3
Query: 663 PVAKVXARXXXVPXVXPRXPPXAXXLGGRXPXXPXGARXPXPPXXAXAAXPXXPP 827
PV + AR P P PP A G P A P PP AA PP
Sbjct: 93 PVPQRAARGATAPTPRPVAPPQA----GTWPLPAPAAMPPPPPPPTGAAAVAPPP 143
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 666 VAKVXARXXXVPXVXPRXPPXAXXLGGRXPXXPX--GARXPXPPXXAXAAXPXXPPXGGS 839
+A + R VP P A P P GA P PP P PP GS
Sbjct: 586 LANIEKRAPRVPRPPPAPSATANTASALPPPPPRPPGAPPPPPPPGKPGGPPPPPPRPGS 645
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 241 VRVHRANTGRSSNELDRQTTELERRGVGLQHLAGVLGTL 357
V+ H R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 666 VAKVXARXXXVPXVXPRXPPXAXXLGGRXPXXPX--GARXPXPPXXAXAAXPXXPPXGGS 839
+A + R VP P A P P GA P PP P PP GS
Sbjct: 891 LANIEKRAPRVPRPPPAPSATANTASALSPPPPRPPGAPPPPPPPGKPGGPPPPPPPPGS 950
>04_04_1126 + 31095651-31096115
Length = 154
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 763 PGVPXXXGPRXXPXPPXPXTPXPGVP 840
P P P P PP P TP P P
Sbjct: 41 PPPPPPPAPSGVPCPPPPYTPTPATP 66
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 247 VHRANTGRSSNELDRQTTELERRGVG 324
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 835 PPXGGXWGXAAXAXXGGXGXRAPXGXXGXRPPRXXAXGGXRG 710
PP GG A GG G R P G G PP G G
Sbjct: 91 PPGGG----GAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGG 128
>07_01_0080 + 587674-588510
Length = 278
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 763 PGVPXXXGPRXXPXPPXPXTPXPGVPAFT 849
P P P P PP P P P P FT
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPPPPLFT 124
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 76 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 216
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 721 PPGQXXXAAGAXVXPGVPXXXGPRXXPXPPXPXTPXPGVP 840
PP AAGA P P P P P P P PG P
Sbjct: 335 PPAPSPSAAGAGSGPPPPP---PPAAPAAPRPPGPGPGPP 371
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 425 GRGERSPRRWLQPRLAVPRQASTSVPRTP 339
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 422 RGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNS 300
R RSPRR P R + + R+PA S +P+R++S
Sbjct: 224 RDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADS 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,695,586
Number of Sequences: 37544
Number of extensions: 556242
Number of successful extensions: 2299
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2220
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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