Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_I02
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 39 0.006
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 37 0.018
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 35 0.094
01_01_0595 - 4430738-4430785,4430904-4432679 34 0.16
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 33 0.22
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 27 0.54
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 32 0.66
10_08_0814 - 20779400-20779487,20779780-20780030,20780528-207808... 31 0.87
07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239 31 0.87
04_03_1017 + 21747044-21748051 31 0.87
10_08_0192 + 15625851-15626765 31 1.5
03_01_0238 + 1854070-1854344,1854621-1854712,1854852-1855045,185... 31 1.5
02_05_1314 - 35661824-35661912,35662031-35662454,35662689-356627... 31 1.5
10_07_0100 + 12861588-12862601 30 2.0
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 30 2.0
12_02_0760 - 22888636-22889407,22889503-22889769,22890001-228903... 30 2.7
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 30 2.7
10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706 30 2.7
07_03_1743 - 29167078-29167290,29167389-29168159 30 2.7
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 30 2.7
04_04_0706 + 27419215-27419371,27419521-27419734,27419818-274199... 30 2.7
08_01_1010 - 10215625-10216335,10216372-10216473 29 3.5
07_01_0663 + 4975950-4977688,4978183-4978528 29 3.5
05_06_0279 + 26896997-26897457,26898100-26898220,26898310-268985... 29 3.5
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 29 3.5
02_05_0190 - 26592452-26592693,26592911-26593004,26593425-265936... 29 3.5
12_02_1217 + 27082452-27083593,27085041-27085158 29 4.7
06_03_0939 + 26131405-26131596,26132753-26133166 29 4.7
03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806 29 4.7
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 29 4.7
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 29 4.7
10_08_0445 + 17989438-17990895 29 6.2
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 29 6.2
05_05_0373 - 24478361-24479383 29 6.2
04_03_0856 + 20336390-20336906,20337276-20337397 29 6.2
10_06_0145 + 11215895-11216860 28 8.1
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 8.1
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924... 28 8.1
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 28 8.1
01_03_0086 - 12316010-12316162,12316626-12316712,12316810-123169... 28 8.1
01_03_0015 + 11669321-11670070 28 8.1
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/86 (31%), Positives = 37/86 (43%)
Frame = +2
Query: 35 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 214
D AKAFD V L L G PD + I++ L + G + G+ Q
Sbjct: 42 DFAKAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQ 101
Query: 215 GSALSPLLFSLYINDIPRSPETHLAL 292
G LSP LF L + + R E +L +
Sbjct: 102 GDPLSPYLFILVADVLQRLLERNLQI 127
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 37.1 bits (82), Expect = 0.018
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 26 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 205
L D KAFD + H+ ++ + +MG P + + ++ S S + G G
Sbjct: 454 LKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPGNSFKCRRG 513
Query: 206 VPQGSALSPLLFSL 247
V QG LS LLF L
Sbjct: 514 VRQGVPLSLLLFVL 527
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 34.7 bits (76), Expect = 0.094
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Frame = +2
Query: 35 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 214
D KAFD V + L L G P+ + I+ LS+ + G R G+ Q
Sbjct: 1057 DFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRWICCKKGLLQ 1116
Query: 215 GSALSPLLFSLYINDIPRSPETHLAL--------------FADDTAIYYSCRKKALLHRR 352
G LS LF L + + R E + + +ADDT I Y + +L
Sbjct: 1117 GDPLSSYLFILVADVLQRLLERNTEIRHAIYQDRPCTTIQYADDTLIIYRAEEADVL--- 1173
Query: 353 LQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 472
T+ Q+ + + IN KST + + LS
Sbjct: 1174 --ALKETLLQFSKATGLQINFAKSTMITLNVDQSKELVLS 1211
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 168 RERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSLPMT-PPSTTRVGRRRCF 344
R+ P +S +APPSP+ + +S P +R + LP + PPS G R
Sbjct: 209 RDAAVSPSIPAKKSARAPPSPKDTAAPVSVCLPSNKRVMPPFLPPSPPPSKESDGARVAA 268
Query: 345 IDDFRPQ 365
+ + +PQ
Sbjct: 269 VKEAKPQ 275
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Frame = +2
Query: 155 RYRVEGTRSRPRHVTAGVPQGSALSPLLFSL---------YINDIPRSPETHLALFADDT 307
R + GT S P G+ QG LSPLLF L +N R+P +L+ADD
Sbjct: 216 RIDINGTLSDPFKPMRGLRQGDPLSPLLFVLKAMSAGLLDKVNQWSRAPNN--SLYADDA 273
Query: 308 AIYY--SCRKKALL 343
I++ C ++ +L
Sbjct: 274 VIFFKPGCNEEEVL 287
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 27.1 bits (57), Expect(2) = 0.54
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 111 DSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWR 290
D+ + ++ ++ +IES P + + PPSP S+ +S+ P L P+
Sbjct: 5 DTIPLHSSSAQSDMDEIESLIHAAPPSAAAVLPAR-PPSPPRASIPVSSSPPLLPPPVAG 63
Query: 291 SLPMTPP 311
S P PP
Sbjct: 64 SKPQLPP 70
Score = 23.8 bits (49), Expect(2) = 0.54
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 357 RPQLPPWDSGSGSGASTLTP 416
+PQLPP+ S S +S+ P
Sbjct: 65 KPQLPPFSSSSSVASSSSPP 84
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +3
Query: 390 GSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSN 569
G+ A+++ P + SS G+A R P S SR GA+ PP F C + G N
Sbjct: 46 GARAASMVPEQ----SSSGLAARVPEHRS-SRYGAASPPPSSFTDGSCFFNGSAGGFFGN 100
Query: 570 I*ASPS 587
SPS
Sbjct: 101 AGQSPS 106
>10_08_0814 -
20779400-20779487,20779780-20780030,20780528-20780812,
20781563-20782008,20782095-20782485
Length = 486
Score = 31.5 bits (68), Expect = 0.87
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +3
Query: 363 QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTS 542
+LP + S + + +ST R A+R S L PR AS S AS +PPPP A S
Sbjct: 9 KLPFFASNASTSSSTKRTRSARRLPS----LTRPR-ASSSPSPASPSPPPPSASHPAPPS 63
Query: 543 P 545
P
Sbjct: 64 P 64
>07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239
Length = 569
Score = 31.5 bits (68), Expect = 0.87
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 393 SGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI 572
+G++ TPR CS GV P+ L S+ PP A S S +P G R+ +
Sbjct: 18 AGSAARTPR-GWCCSFAGV----PQSPDLRPFPPSLAPPATAASS--SPAPGGGAGRNKL 70
Query: 573 *A-SPSTVG*HSAPTSRRYA 629
SPS HS+PTS R A
Sbjct: 71 PPKSPSISSFHSSPTSSRLA 90
>04_03_1017 + 21747044-21748051
Length = 335
Score = 31.5 bits (68), Expect = 0.87
Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 11/165 (6%)
Frame = +3
Query: 180 PGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSLPMTPPSTTRVGRRRCFIDDFR 359
P + P+ P R S + P RR S TP S R RR D+
Sbjct: 139 PSRRAASPDYTPESPPRRAASPDYTPASPS-RRAAASSPDYTPESPPR---RRAASPDYS 194
Query: 360 PQLPPWDSGSGSGASTLTPRKA-----------QRCSSKGVALRTPR*ASLSRLGASITP 506
P PP + S + + PR+A +R +S +P + S +TP
Sbjct: 195 PSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTP 254
Query: 507 PPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 641
P A + S PR ++ +PST P++ TVPP
Sbjct: 255 PRRAASPDYTPSTPPPPRAASPDYTPSTPPSSPLPSAAESFTVPP 299
>10_08_0192 + 15625851-15626765
Length = 304
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +3
Query: 501 TPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 647
TPPPP A S S P++ S+ P+ APTS AT PP F
Sbjct: 6 TPPPPSAPS--SAPPFKSNASSS---RPNRAPPEGAPTSPAAATRPPPF 49
>03_01_0238 +
1854070-1854344,1854621-1854712,1854852-1855045,
1855529-1855568,1855734-1855815,1856972-1857049,
1857144-1857269,1857544-1857665,1858018-1858057,
1858250-1858324,1858414-1858585
Length = 431
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 308 AIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL-SIPLP 484
AI CR + RRL AA + +WRID N K A R R T + S+P P
Sbjct: 32 AIRCCCRAQQEPRRRLSKAAAAAPERTEEWRIDGN--KPAAAARGRRRASLTAMPSLPFP 89
Query: 485 TRR 493
+ R
Sbjct: 90 SPR 92
>02_05_1314 -
35661824-35661912,35662031-35662454,35662689-35662787,
35662886-35662995,35663263-35663516,35664080-35664098,
35664834-35665075,35665662-35666401
Length = 658
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 PMTPPSTTRVGRRRCFIDDFRP-QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP 464
P+ PPS CF+ P + W + + + PR+ S+ + L TP
Sbjct: 9 PLPPPSLAAASTSSCFLPSLLPIRRRRWPTPKATATAAFPPRRPAPLSANNLPLHTP 65
>10_07_0100 + 12861588-12862601
Length = 337
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 198 QPESRKAPPSPRYYSVCISTIYPG-----LRRPIWRSLPMTPPSTTRVGRRR 338
+P +++ SP Y ST P RRP P TPP+TT R R
Sbjct: 180 RPSAQRPACSPDYPEPACSTAPPSSSSSYARRPCHAKTPRTPPTTTTTARAR 231
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/85 (32%), Positives = 41/85 (48%)
Frame = +3
Query: 387 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 566
+ +G+ LTP+ SS A RTP A+ + ++ P P A R STS PR S
Sbjct: 14 AAAGSRPLTPKAFSASSS---ARRTPAAAAAGKENSASKPSKPTAAVRWSTSSI--PRAS 68
Query: 567 NI*ASPSTVG*HSAPTSRRYATVPP 641
I PS+V ++ R ++V P
Sbjct: 69 RI---PSSVESSKLVSTLRASSVMP 90
>12_02_0760 -
22888636-22889407,22889503-22889769,22890001-22890302,
22890402-22890512,22890990-22891568,22892026-22892087,
22892434-22892754,22893434-22893776
Length = 918
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/80 (32%), Positives = 31/80 (38%)
Frame = +3
Query: 264 PGLRRPIWRSLPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSK 443
P RRP+ P R GRRRC D + PP + GA PR K
Sbjct: 294 PATRRPVLGGRGRPYPRRCRTGRRRCRTDP-SSESPP----AKDGAGIYVPRDEAFTERK 348
Query: 444 GVALRTPR*ASLSRLGASIT 503
A T + +LS L A T
Sbjct: 349 AGAFATKK--ALSALSAFTT 366
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 29.9 bits (64), Expect = 2.7
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Frame = +3
Query: 279 PIWRSLPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTP--RKAQRCSSKGVA 452
P RS+ T PS+ F +P P W + A TLTP R S+
Sbjct: 158 PSPRSMSRTRPSSAASRSSPPFA--LQPPTPSWRPSTPPSAKTLTPPRRSPSPASTLTPP 215
Query: 453 LRTPR*ASLSRLGASITP-------PPPFAQSRCSTSPYRGPRRSNI 572
R+P AS R+ TP P P +R S+SP SN+
Sbjct: 216 RRSPSPAS-RRMSTGSTPALNRTRGPSPVKTNRISSSPKLQGWHSNV 261
>10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706
Length = 169
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 CRTVRSDIESRERVPGPVTSQPESRKAPPSP---RYYSV-CISTIYPGLRRPIWRSLPMT 305
CRT ES + PG P +AP +P R + V +S L R WR P
Sbjct: 45 CRTPTGG-ESNLKAPGTCPPAPRKPRAPAAPCRKRLFEVEVLSLRLEELERLFWR--PPP 101
Query: 306 PPSTTR 323
PP TT+
Sbjct: 102 PPPTTQ 107
>07_03_1743 - 29167078-29167290,29167389-29168159
Length = 327
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 117 CSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGL--RRPIWR 290
C +T T + DI ++ P V + PE PP P Y++ + PGL + +
Sbjct: 141 CFCEKTWSHTPQYDIGYCQQRPDEV-AWPERELGPPPPLYFNAGMFVHEPGLGTAKDLLD 199
Query: 291 SLPMTPPS 314
+L +TPP+
Sbjct: 200 ALVVTPPT 207
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 486 LGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 641
L AS PPPP R S SP + P ++ P T + PT+ A PP
Sbjct: 73 LAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPP 124
>04_04_0706 +
27419215-27419371,27419521-27419734,27419818-27419913,
27420006-27420123,27420211-27420384,27420633-27420803,
27420932-27420987,27421125-27421214,27421296-27421444,
27421640-27421722,27421830-27421958,27422063-27422137,
27422248-27422416,27422965-27423104,27423191-27423298,
27423603-27423783,27424445-27424542,27424639-27424728,
27424881-27425034,27425376-27425431,27425483-27425533,
27425651-27425732,27425821-27425995,27426748-27426823,
27426951-27427121,27427198-27427269,27427350-27427454,
27427948-27428037,27428703-27428908,27428989-27429190,
27429294-27429473,27429858-27429925,27430005-27430341,
27430428-27430637,27430765-27431448,27431537-27431940,
27432495-27432542,27432777-27433023,27433381-27433602,
27433796-27434026
Length = 2122
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 145 VRQVVSYDEHESVWHSHVIQFVYQTVVPDFVERLRY 38
V +V Y + HSH+I+ V + FVER+ Y
Sbjct: 352 VESLVGYSSSDDSCHSHLIEIVETLNIEKFVERIVY 387
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 44/163 (26%), Positives = 57/163 (34%), Gaps = 4/163 (2%)
Frame = +3
Query: 168 RERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSLPMTPPSTTRVGRRRCFI 347
R P S P R A P Y+ T P + TPP RR
Sbjct: 67 RAASPDYTPSTPPRRAASPD---YTPSTPTTPRRAASPDYTPSTPTPP-------RRAAS 116
Query: 348 DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQS 527
D+ P PP + S + TP +R +S TP+ + S TP PP +
Sbjct: 117 PDYTPSTPPPRAASPDYTPS-TPTPPRRAASPNYTPSTPQRHAASPDYTPSTPTPPRRAA 175
Query: 528 RCSTSPYRGPRRSNI*ASPSTVG*HSAP--TSRRY--ATVPPS 644
+P P R+ ASP P S Y +T PPS
Sbjct: 176 SLDYTPSTPPPRA---ASPDYTPLSPPPRAASPEYSPSTPPPS 215
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 372 PWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL----GASITPPPP 515
PW + + + A+ TP + + + + TP S+S G TPPPP
Sbjct: 349 PWSAAAAAAATQFTPSRRPKKDHPEIVMGTPTPLSMSAYTLSEGDYRTPPPP 400
>05_06_0279 +
26896997-26897457,26898100-26898220,26898310-26898586,
26898735-26898895
Length = 339
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 148 FVPISSRGNAFPAPSRHSRSPARLRPLPVTIQFVYQRYTPVS 273
F+P ++ G+A AP+R R+P R R +P T+ R P++
Sbjct: 53 FLPAAA-GSACEAPARKKRTPGRWRRIPRTLPHPCLRKRPMT 93
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 486 LGASITPPPPFAQSRCSTSPYRGP 557
LGA++ PPPP A ++ + +P GP
Sbjct: 82 LGAALPPPPPAAAAQPAVAPLPGP 105
>02_05_0190 -
26592452-26592693,26592911-26593004,26593425-26593656,
26594660-26595066
Length = 324
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/60 (36%), Positives = 26/60 (43%)
Frame = +3
Query: 384 GSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRR 563
G G GAST SS G PR S RL + +PPPP A + + R RR
Sbjct: 27 GGGGGASTSATSPVAASSSSG---GRPRTRSGGRLLRATSPPPPSAIAAAACWESRTMRR 83
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 78 YTNCITWECQTDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSP 230
Y ++ C T +CS E V SD + + G + + R PP P
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDLYGGELEEEDSPRPPPPRP 77
>06_03_0939 + 26131405-26131596,26132753-26133166
Length = 201
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 421 FRGVNVDAPLPEPLSHGGSCGLKS--SMKQRLLPTRVVDGGVIGKERQ 284
F G++ APLP P + G CG + S+ + P+ ++ G + ++R+
Sbjct: 134 FSGLHYKAPLPRPSAGGHRCGAVATPSVTDEVAPSALLLGHIAPQQRK 181
>03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806
Length = 170
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 422 STAVLFKRGRPPNTTLSIPLPTRR 493
S FKRG PP + +PLP R+
Sbjct: 118 SNGYAFKRGNPPEGIVEVPLPPRQ 141
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 126 YETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGL 272
Y TT R + + E PG S ESR +PP P Y C S++Y L
Sbjct: 225 YSTTSRRYERFV-ALEEAPG---SYDESRFSPPFPYDYLYCGSSLYGNL 269
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/67 (20%), Positives = 29/67 (43%)
Frame = +3
Query: 120 SSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSLP 299
+ Y + + + + ER P P P +R P ++C+++ GL +P
Sbjct: 700 NDYTSQHEIAQQTLSTSERQPQPEKKPPRTRPPLPGKAVAALCVASFVVGLLLSGRVVVP 759
Query: 300 MTPPSTT 320
+ PP ++
Sbjct: 760 LLPPGSS 766
>10_08_0445 + 17989438-17990895
Length = 485
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 357 RPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCS 536
RP P + PR+ +R ++ VA R R S ++TPPP R
Sbjct: 368 RPVTVPKSETWATTTDEQQPRRRERAAAAAVARREIR---KSATATNMTPPPSPPHVRAP 424
Query: 537 TSPYRGPRRS 566
+P R P R+
Sbjct: 425 PAPARRPWRT 434
>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
Length = 520
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = -1
Query: 211 RDSGCDVTGPGTRSLDSISERTVRQVVSYDEHESVWHSHVIQFVYQTVVPDFVERLR 41
+ SGC++ G TR + +++ + + +EHE+ +S ++ ++ + D +RLR
Sbjct: 78 KHSGCEIVGEETRKVCNVTMEHLEKSSLSEEHEAPSYSQALRCTPESSL-DSTKRLR 133
>05_05_0373 - 24478361-24479383
Length = 340
Score = 28.7 bits (61), Expect = 6.2
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Frame = +3
Query: 273 RRPIWRS-LPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGV 449
R+P +R+ +P+ S + R D F L G G GA GV
Sbjct: 96 RQPRFRAEIPVVDDSPGSLARLAS--DVFSSGLGLSRKGGGGGAPARLLLVWPSSEEMGV 153
Query: 450 ALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI 572
ALR P S A + P A S C + + P RS +
Sbjct: 154 ALREPHDWGESTAHAQLDAVAPDALSSCDAAVFLAPGRSQV 194
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 288 RSLPMTPPST-TRVGRRRCFIDDFRPQLPPWDSGSGSG 398
RS P S TRVGRRR F F P W +G +G
Sbjct: 10 RSSPRGDASAPTRVGRRRAFPLPFASPPPEWPAGKLAG 47
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 114 SCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPR 233
S S TT +D+ S P P +S + PP+PR
Sbjct: 240 SVSEASTTTTADAADVSSTGSSPSPTSSNQAATATPPAPR 279
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 170 GTRSRPRHVTAGVPQGSALSP 232
G RSRPR AG PQ +A SP
Sbjct: 156 GRRSRPRRCLAGRPQATAGSP 176
>04_04_0276 +
24091360-24091464,24091580-24091713,24091813-24092454,
24092858-24093044
Length = 355
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 565 QIFRRHPRQ*DDIPPPHQDGTRPCRL 642
Q+FR H D P H DG RPCR+
Sbjct: 266 QLFRLHASVCDRAAP-HDDGDRPCRV 290
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 35 DIAKAFDKVWHNGLIYKLYNMG-VPDRLVL 121
D+A+AF+ V H G + +YN+G V +R V+
Sbjct: 230 DVAEAFEVVLHKGEVGHVYNIGTVKERRVI 259
>01_03_0086 -
12316010-12316162,12316626-12316712,12316810-12316942,
12317057-12317330,12317588-12317714,12317815-12318071,
12319055-12319139
Length = 371
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +1
Query: 142 EPFVPISSRGNAF----PAPSRHSRSPARLRPLPVTI 240
+P+VPI G + P P SRSP R LP+ +
Sbjct: 20 DPYVPIPDPGGNYGRSKPGPPAPSRSPPTSRNLPIAV 56
>01_03_0015 + 11669321-11670070
Length = 249
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 GSARQTRAHHTRLLVEPFVPISSRG-NAFPAPSRHSRSPARLRPLPVTI 240
G +R TR RLL + + PAPS PA LR LPV +
Sbjct: 88 GDSRTTRRRERRLLRSLAIGAGDDDRDGGPAPSPRGLDPAVLRALPVVV 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,322,178
Number of Sequences: 37544
Number of extensions: 723506
Number of successful extensions: 2957
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2950
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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