Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_I01
         (864 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    57   7e-08
BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    39   0.027

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 57.2 bits (132), Expect = 7e-08
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = +1

Query: 97  VNYAWSGRSQGKP*WRTVAILTCKSIVGTGYRG 195
           VNYAW+GRSQ K  WR+VA+LTCKS+V  GYRG
Sbjct: 2   VNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRG 34


>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 38.7 bits (86), Expect = 0.027
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = -2

Query: 710 WXPQASYPCGNFXGTSXLK 654
           W PQASYPCGNF  TS LK
Sbjct: 19  WPPQASYPCGNFSDTSCLK 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,661,221
Number of Sequences: 237096
Number of extensions: 2768168
Number of successful extensions: 9259
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9256
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)