Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_H24
(898 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 5e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 1e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 2e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.18
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.23
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 2.9
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 5.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 5.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 68 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 226
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 227 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 400
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 401 VSNNGSVSW 427
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 27.5 bits (58), Expect = 0.18
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 462 CSLD--NWPXDMQTCTFKFGSRMHNSDEMD 545
C +D +P D QTC KFGS ++ ++D
Sbjct: 145 CEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 86 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 250
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 251 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 352
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 27.1 bits (57), Expect = 0.23
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 459 LCSLDN--WPXDMQTCTFKFGSRMHNSDEM 542
+C D+ WP D+ CT S H S+E+
Sbjct: 158 VCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.2 bits (107), Expect = 2e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +2
Query: 86 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 244
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 245 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 418
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 419 VSW 427
V W
Sbjct: 137 VEW 139
Score = 27.5 bits (58), Expect = 0.18
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 462 CSLD--NWPXDMQTCTFKFGSRMHNSDEMD 545
C +D +P D QTC KFGS ++ ++D
Sbjct: 149 CEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Frame = +2
Query: 56 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 214
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 215 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 391
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 392 ----RARVSNNGSVSW 427
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 25.4 bits (53), Expect = 0.71
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 462 CSLD--NWPXDMQTCTFKFGSRMHNSDEMD 545
C +D +P D QTC KFGS ++ +D
Sbjct: 145 CEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.4 bits (105), Expect = 4e-07
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Frame = +2
Query: 47 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 205
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 206 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG 379
+ E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 380 DYALRARVSNNGSVSWI 430
Y V NNG+ ++
Sbjct: 123 TYPTNVVVKNNGTCLYV 139
Score = 26.2 bits (55), Expect = 0.41
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVIDKR----XYXMFESGAWDV 599
C +D W P D Q C KFGS ++ ++D + +G WD+
Sbjct: 148 CKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.10
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.10
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.10
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWI 430
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.10
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 462 CSLD-NW-PXDMQTCTFKFGSRMHNSDEMDFVI 554
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.0 bits (104), Expect = 5e-07
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Frame = +2
Query: 113 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 271
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 272 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 427
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 465 SLDNWPXDMQTCTFKFGSRMHNSDEMD 545
+++ +P D Q+C KFGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 427
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 462 CSLD--NWPXDMQTCTFKFGSRMHNSDEMD 545
C +D +P D QTC KFGS ++ ++D
Sbjct: 153 CEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +2
Query: 167 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 343
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 344 VVLLNAAATTAGDYALRAR--VSNNGSVSWI 430
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 259
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 260 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 358
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 25.8 bits (54), Expect = 0.54
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 465 SLDNWPXDMQTCTFKFGS 518
+L+N+P D Q C +FGS
Sbjct: 133 NLENFPMDTQRCPLQFGS 150
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.4 bits (100), Expect = 1e-06
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 337
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 338 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 430
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 35.1 bits (77), Expect = 9e-04
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +3
Query: 453 QFLCSLD--NWPXDMQTCTFKFGSRMHNSDEMDFVI--DKRXYXM---FESGAWDV 599
Q C++D +P D QTC KFGS N D++ + +K + ++SG WD+
Sbjct: 148 QSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 8e-06
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 427
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +3
Query: 462 CSLDN--WPXDMQTCTFKFGSRMHNSDEMD 545
CS+D +P D+QTC K GS ++ ++D
Sbjct: 153 CSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 40.3 bits (90), Expect = 2e-05
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +2
Query: 101 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 265
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 266 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 436
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 437 LDISTPISMQFR 472
L I M+ R
Sbjct: 156 LTIKAKCPMELR 167
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 39.5 bits (88), Expect = 4e-05
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Frame = +2
Query: 38 FCYRFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHAN 205
F + +LL C ++ T+L + L YD + P S +I N+T+ L +
Sbjct: 27 FGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLME 81
Query: 206 IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT--- 373
+ S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQ 141
Query: 374 AGDYALRARVSNNGSVSWI 430
G V ++GSVS +
Sbjct: 142 TGIPPTTCLVFSSGSVSCV 160
Score = 38.3 bits (85), Expect = 9e-05
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +3
Query: 462 CSLD--NWPXDMQTCTFKFGSRMHNSDEMDFVIDKRXYXM---FESGAWDVTALSS 614
C+ D +WP D C FGS +H+ +E++ +DK+ + M + WD + +
Sbjct: 169 CATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFKVIKA 224
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.3 bits (80), Expect = 4e-04
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 271
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 272 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 436
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 437 LDISTPISMQFR 472
+ ++ M +
Sbjct: 154 ISLTLSCPMNLK 165
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 441 TLALQFLCSLDNWPXDMQTCTFKFGSRMHNSDEMDFV 551
+L L +L +P D Q C+ + S +D++ F+
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.18
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 444 LALQFLCSLDN--WPXDMQTCTFKFGSRMHNSDEMDFVID 557
L L+ C+++ +P D Q C + S H +DEM F D
Sbjct: 157 LTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.1 bits (57), Expect = 0.23
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 432 SAWTLALQFLCSLDNWPXDMQTCTFKFGSRMHNSDEMDFV 551
S TL L +++P D Q C+ S H + ++ F+
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 468 LDNWPXDMQTCTFKFGSRMHNSDEM 542
L+ +P D+Q C F S HN +M
Sbjct: 146 LEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 167 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 328
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 329 LWRPDVVLLNA 361
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 441 TLALQFLCSLDNWPXDMQTCTFKFGSRMHNSDEMDFV 551
+L L +L +P D Q C+ + S +D++ F+
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 310 PSAAAPLPCVPTQS 269
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 109 GQ*CCVFAFCRTSYSTSEEKPVTE 38
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,579
Number of Sequences: 438
Number of extensions: 5245
Number of successful extensions: 89
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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